RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 KCNG1Q9UIX4 513 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 C2CD2LO14523 706 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 MAFGO15525 162 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 LUC7L3O95232 432 aaKnown RBP23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 BLMHQ13867 455 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 WASHC2DQ5SRD0 308 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 HP1BP3Q5SSJ5 553 aaPredicted RBP23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 VSIG10LQ86VR7 867 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 STK32AQ8WU08 396 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 TLE6Q9H808 572 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 CYP26B1Q9NR63 512 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 ZNF541Q9H0D2 1346 aa23.34■■□□□ 1.33
HTATSF1-201ENST00000218364 SMNDC1O75940 238 aaKnown RBP eCLIP23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 CHRNA5P30532 468 aa23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 ACOT2P49753 483 aa23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 ZNF132P52740 706 aa23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 GEMIN4P57678 1058 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 GPX6P59796 221 aa23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 PDIA2Q13087 525 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 FARP1Q9Y4F1 1045 aaPredicted RBP23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 NUB1Q9Y5A7 615 aa23.33■■□□□ 1.33
HTATSF1-201ENST00000218364 FGFR1P11362 822 aa23.33■■□□□ 1.32
HTATSF1-201ENST00000218364 LVRNQ6Q4G3 990 aa23.33■■□□□ 1.32
HTATSF1-201ENST00000218364 ZNF606Q8WXB4 792 aa23.33■■□□□ 1.32
HTATSF1-201ENST00000218364 HAPLN2Q9GZV7 340 aa23.33■■□□□ 1.32
HTATSF1-201ENST00000218364 PIGRP01833 764 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 TFDP3Q5H9I0 405 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 SWSAP1Q6NVH7 229 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 LONP2Q86WA8 852 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 UBR7Q8N806 425 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 SLC35B2Q8TB61 432 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 NAF1Q96HR8 494 aaKnown RBP23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 SAR1AQ9NR31 198 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 LNPEPQ9UIQ6 1025 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 RABGEF1Q9UJ41 708 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 CALB1P05937 261 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 PSAPP07602 524 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 TPBGLP0DKB5 382 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 KCNA2P16389 499 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 GM2AP17900 193 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 NOP14P78316 857 aaKnown RBP23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 TAF11Q15544 211 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 CMPK2Q5EBM0 449 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 PCGF5Q86SE9 256 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 CGRRF1Q99675 332 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 DHRS4Q9BTZ2 278 aa23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 DDX56Q9NY93 547 aaKnown RBP23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 RBAKQ9NYW8 714 aaPredicted RBP23.32■■□□□ 1.32
HTATSF1-201ENST00000218364 CLUHO75153 1309 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 HNRNPCL1O60812 293 aaKnown RBP23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 CCND2P30279 289 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 CDKN2BP42772 138 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 ZFYVE27Q5T4F4 411 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 SEPT9Q9UHD8 586 aaPredicted RBP23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 CORO1CQ9ULV4 474 aaPredicted RBP23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 F8VP50 259 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 KRT4P19013 534 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 CAPN12Q6ZSI9 719 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 NLRP9Q7RTR0 991 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 ZNF276Q8N554 614 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 KCNV2Q8TDN2 545 aa23.31■■□□□ 1.32
HTATSF1-201ENST00000218364 PTPN4P29074 926 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 OGDHQ02218 1023 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 HIF1AQ16665 826 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 SLFN12LQ6IEE8 588 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 ADGRD1Q6QNK2 874 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 TMEM121Q9BTD3 319 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 ZMYND8Q9ULU4 1186 aaPredicted RBP23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 NEBLO76041 1014 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 CBX6O95503 412 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 LSM8O95777 96 aaKnown RBP23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 LDHAP00338 332 aaKnown RBP23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 ABL2P42684 1182 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 PRKCEQ02156 737 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 TAF1BQ53T94 588 aaPredicted RBP23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 PPP1R15BQ5SWA1 713 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 FYB2Q5VWT5 728 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 TXNRD3NBQ6F5E7 133 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 ZNF449Q6P9G9 518 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 TEX9Q8N6V9 391 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 NIPA2Q8N8Q9 360 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 MZB1Q8WU39 189 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 SNCAIPQ9Y6H5 919 aa23.3■■□□□ 1.32
HTATSF1-201ENST00000218364 NR3C2P08235 984 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 EPHB2P29323 1055 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 PHBP35232 272 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 PIGHQ14442 188 aaPredicted RBP23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 MAPK6Q16659 721 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 CTC1Q2NKJ3 1217 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 DHX37Q8IY37 1157 aaKnown RBP23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 MTMR14Q8NCE2 650 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 MCEEQ96PE7 176 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 ZFP69BQ9UJL9 534 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 CNTNAP2Q9UHC6 1331 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 SGK1O00141 431 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 GLRA2P23416 452 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 TAP1Q03518 808 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 DNAJC24Q6P3W2 148 aa23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 CCDC60Q8IWA6 550 aaPredicted RBP23.29■■□□□ 1.32
HTATSF1-201ENST00000218364 WDR81Q562E7 1941 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms