RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 JRKLQ9Y4A0 524 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 SLC30A1Q9Y6M5 507 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 MYO5BQ9ULV0 1848 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 CASQ2O14958 399 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 EIF3DO15371 548 aaKnown RBP eCLIP14.43□□□□□ -0.1
SIX4-201ENST00000216513 ZFXP17010 805 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 NCF2P19878 526 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 FPGSQ05932 587 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 PTK2BQ14289 1009 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 ZBTB41Q5SVQ8 909 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 SYT2Q8N9I0 419 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 MS4A14Q96JA4 679 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 STX1BP61266 288 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 KCTD19Q17RG1 926 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 CCDC33Q8N5R6 958 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 TBC1D19Q8N5T2 526 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 AGPAT1Q99943 283 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 CDC23Q9UJX2 597 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 RALBP11234 206 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 CLCN6P51797 869 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 Q4G0T1 1027 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 MAML1Q92585 1016 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 METTL5Q9NRN9 209 aaKnown RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 KLHL14Q9P2G3 628 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 LGALS16A8MUM7 142 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 CHEK2O96017 543 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 TROVE2P10155 538 aaKnown RBP eCLIP14.42□□□□□ -0.1
SIX4-201ENST00000216513 MX2P20592 715 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 TAP1Q03518 808 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 LBRQ14739 615 aaKnown RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 IMPG1Q17R60 797 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 TPGS1Q6ZTW0 290 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 C4orf19Q8IY42 314 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 IRS2Q9Y4H2 1338 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 SCP2P22307 547 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 HVCN1Q96D96 273 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 ANLNQ9NQW6 1124 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 ASAH2Q9NR71 780 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 APEX2Q9UBZ4 518 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 ADCY6O43306 1168 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 SLC2A3P11169 496 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 CCDC38Q502W7 563 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 SYT15Q9BQS2 421 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 COG4Q9H9E3 785 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 INTS9Q9NV88 658 aaKnown RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 EFCAB14O75071 495 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 AXLP30530 894 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 CSE1LP55060 971 aaKnown RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 GBP7Q8N8V2 638 aaPredicted RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 DRC3Q9H069 523 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 RIOX1Q9H6W3 641 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 DDX56Q9NY93 547 aaKnown RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 ST3GAL5Q9UNP4 418 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 ZDHHC9Q9Y397 364 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 SGCGQ13326 291 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 LRRC14Q15048 493 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 LMNTD2Q8IXW0 634 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 RNF10Q8N5U6 811 aaKnown RBP14.42□□□□□ -0.1
SIX4-201ENST00000216513 FGD4Q96M96 766 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
SIX4-201ENST00000216513 MAPK13O15264 365 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 RASSF3Q86WH2 238 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 CYTH2Q99418 400 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 UXTQ9UBK9 157 aaPredicted RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 PBLDP30039 288 aaPredicted RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 FOXR1Q6PIV2 292 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 SHROOM1Q2M3G4 852 aaPredicted RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 FBXO38Q6PIJ6 1188 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 CBWD2Q8IUF1 395 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 SCG3Q8WXD2 468 aaKnown RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 IL17RAQ96F46 866 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 POP1Q99575 1024 aaKnown RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 C7orf25Q9BPX7 421 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 MRPL46Q9H2W6 279 aaKnown RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 RHOCP08134 193 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 EPHB2P29323 1055 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 DHX40Q8IX18 779 aaKnown RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 CGRRF1Q99675 332 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
SIX4-201ENST00000216513 RNF186Q9NXI6 227 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 MT-ND3P03897 115 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 TAC1P20366 129 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 PPM1AP35813 382 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 CASP4P49662 377 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 NNTQ13423 1086 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 FAM47EQ6ZV65 393 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 CENPUQ71F23 418 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 LRRC8DQ7L1W4 858 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 OSGEPL1Q9H4B0 414 aa14.41□□□□□ -0.1
SIX4-201ENST00000216513 CBX4O00257 560 aa14.4□□□□□ -0.1
SIX4-201ENST00000216513 GNRH1P01148 92 aa14.4□□□□□ -0.1
SIX4-201ENST00000216513 HSPA1AP0DMV8 641 aaKnown RBP14.4□□□□□ -0.1
SIX4-201ENST00000216513 HSPA1BP0DMV9 641 aaKnown RBP14.4□□□□□ -0.1
SIX4-201ENST00000216513 TUFMP49411 452 aaKnown RBP14.4□□□□□ -0.1
SIX4-201ENST00000216513 MTHFD1LQ6UB35 978 aa14.4□□□□□ -0.1
SIX4-201ENST00000216513 FAM71BQ8TC56 605 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms