RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 LCP1P13796 627 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 C10orf88Q9H8K7 445 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 CACNB3P54284 484 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 GSPT2Q8IYD1 628 aaKnown RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 RSPH1Q8WYR4 309 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 MAPTP10636 758 aaKnown RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 THEMIS2Q5TEJ8 643 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 RBM12Q9NTZ6 932 aaKnown RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 USP27XA6NNY8 438 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 FCGR1AP12314 374 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 TRPC1P48995 793 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 ALDH18A1P54886 795 aaKnown RBP13.09□□□□□ -0.31
LMCD1-201ENST00000157600 KDSRQ06136 332 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 DMC1Q14565 340 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 MAGEB18Q96M61 343 aa13.09□□□□□ -0.31
LMCD1-201ENST00000157600 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.31
LMCD1-201ENST00000157600 CYLC2Q14093 348 aaPredicted RBP13.08□□□□□ -0.31
LMCD1-201ENST00000157600 ILKAPQ9H0C8 392 aaPredicted RBP13.08□□□□□ -0.31
LMCD1-201ENST00000157600 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.31
LMCD1-201ENST00000157600 DCCP43146 1447 aa13.08□□□□□ -0.31
LMCD1-201ENST00000157600 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 PLD3Q8IV08 490 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SLC7A14Q8TBB6 771 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 KCNB2Q92953 911 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 PIDD1Q9HB75 910 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 GIMAP4Q9NUV9 329 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 ALG6Q9Y672 507 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 FAM200BP0CF97 657 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 PRKCEQ02156 737 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 KYNUQ16719 465 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 CDR2LQ86X02 465 aaPredicted RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SPON2Q9BUD6 331 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 TASP1Q9H6P5 420 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 AGAP1Q9UPQ3 857 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 ARIH2O95376 493 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 ENO1P06733 434 aaKnown RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 ARHGEF7Q14155 803 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 C11orf63Q6NUN7 778 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 BBS7Q8IWZ6 715 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 MYH9P35579 1960 aaKnown RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SOAT2O75908 522 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SRP72O76094 671 aaKnown RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 RGL1Q9NZL6 768 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 BNIP3LO60238 219 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 NAMPTP43490 491 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SERPINB8P50452 374 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SNAP25P60880 206 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 ACAD10Q6JQN1 1059 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 CLMNQ96JQ2 1002 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 PPP1R16BQ96T49 567 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 POLIQ9UNA4 740 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SATB2Q9UPW6 733 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 PKP3Q9Y446 797 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 TECPR2O15040 1411 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 CEP170BQ9Y4F5 1589 aaPredicted RBP13.08□□□□□ -0.32
LMCD1-201ENST00000157600 MAPK1P28482 360 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 VHLP40337 213 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 STK4Q13043 487 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 GLB1LQ6UWU2 654 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 RNF135Q8IUD6 432 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 SLC30A1Q9Y6M5 507 aa13.08□□□□□ -0.32
LMCD1-201ENST00000157600 PRPF4O43172 522 aaKnown RBP eCLIP13.07□□□□□ -0.32
LMCD1-201ENST00000157600 ODC1P11926 461 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 KCNK10P57789 538 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 USP10Q14694 798 aaKnown RBP13.07□□□□□ -0.32
LMCD1-201ENST00000157600 SLC30A9Q6PML9 568 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 CLEC4FQ8N1N0 589 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 ENOPH1Q9UHY7 261 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 FBXO21O94952 628 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 KPNA1P52294 538 aaPredicted RBP13.07□□□□□ -0.32
LMCD1-201ENST00000157600 PRKAA2P54646 552 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 AFF2P51816 1311 aa13.07□□□□□ -0.32
LMCD1-201ENST00000157600 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms