RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 STK10O94804 968 aaKnown RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 KRT3P12035 628 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 AMPD2Q01433 879 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 NXNQ6DKJ4 435 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 CENPUQ71F23 418 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 SDCCAG8Q86SQ7 713 aaPredicted RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 HVCN1Q96D96 273 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 HPDLQ96IR7 371 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 RSRC1Q96IZ7 334 aaKnown RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 MKNK1Q9BUB5 465 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 DHX35Q9H5Z1 703 aaKnown RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 AJAP1Q9UKB5 411 aaPredicted RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 PYGMP11217 842 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 HOXD13P35453 343 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 MAPK7Q13164 816 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 ARHGEF18Q6ZSZ5 1173 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 EPM2AIP1Q7L775 607 aaPredicted RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 NIPA1Q7RTP0 329 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 KDELC2Q7Z4H8 507 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 MAML3Q96JK9 1138 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 CFAP57Q96MR6 1250 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 PWWP2AQ96N64 755 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 LRRC4Q9HBW1 653 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 AIPL1Q9NZN9 384 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 LRP5O75197 1615 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 COL4A5P29400 1685 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 COL5A3P25940 1745 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 ADAMTSL1Q8N6G6 1762 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 MAGEB2O15479 319 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 MAP2K5Q13163 448 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 SNCBQ16143 134 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 SLC13A5Q86YT5 568 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 RDM1Q8NG50 284 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 SYN2Q92777 582 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 GLT1D1Q96MS3 346 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 KIAA1586Q9HCI6 787 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 UMODL1Q5DID0 1318 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 HUS1O60921 280 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 MFSD10Q14728 455 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 CFAP61Q8NHU2 1237 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 CHMP6Q96FZ7 201 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 C12orf42Q96LP6 360 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 TGS1Q96RS0 853 aaKnown RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 LACTBL1A8MY62 500 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 NFICP08651 508 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 GNAT1P11488 350 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 MAP2K2P36507 400 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 LMNB2Q03252 620 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 PRKCZQ05513 592 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 NME3Q13232 169 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 LGSNQ5TDP6 509 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 BBOF1Q8ND07 529 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 HAUS2Q9NVX0 235 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 PCDHB2Q9Y5E7 798 aa12.7□□□□□ -0.38
CHPF2-201ENST00000035307 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
CHPF2-201ENST00000035307 B3GAT3O94766 335 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 HOXA7P31268 230 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 PEX19P40855 299 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CDK17Q00537 523 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 HYIQ5T013 277 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 KIAA1841Q6NSI8 718 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MCUQ8NE86 351 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 LNX1Q8TBB1 728 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 SCYL1Q96KG9 808 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CAPNS2Q96L46 248 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 AGAP3Q96P47 875 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MINDY3Q9H8M7 445 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MARCOQ9UEW3 520 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CST8O60676 142 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CST3P01034 146 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 TRIM32Q13049 653 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MPZL3Q6UWV2 235 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MAP4K3Q8IVH8 894 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 SNF8Q96H20 258 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 GANQ9H2C0 597 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CNOT10Q9H9A5 744 aaKnown RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 APRTP07741 180 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 MAPTP10636 758 aaKnown RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 ADSSP30520 456 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 PTPN18Q99952 460 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CARD9Q9H257 536 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 GPATCH2LQ9NWQ4 482 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 SAE1Q9UBE0 346 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-201ENST00000035307 CHMP2BQ9UQN3 213 aa12.69□□□□□ -0.38
CHPF2-201ENST00000035307 TMEM120BA0PK00 339 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 MED7O43513 233 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms