RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 IL1RL1Q01638 556 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 PPP6R3Q5H9R7 873 aaPredicted RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 TRIM72Q6ZMU5 477 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 TRIM67Q6ZTA4 783 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ACER1Q8TDN7 264 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ANKRD27Q96NW4 1050 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 RBM15Q96T37 977 aaKnown RBP eCLIP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 SH3GL2Q99962 352 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 TRPV6Q9H1D0 765 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 IP6K2Q9UHH9 426 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 DDTLA6NHG4 134 aaPredicted RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 PJA2O43164 708 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 GPC4O75487 556 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ECE1P42892 770 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 SLC1A1P43005 524 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 DNAJC3Q13217 504 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ATP1A4Q13733 1029 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 HIC1Q14526 733 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 ZNF699Q32M78 642 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 TMEM119Q4V9L6 283 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 CRELD2Q6UXH1 353 aaPredicted RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 HEATR4Q86WZ0 1026 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 CRLF3Q8IUI8 442 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 SDCCAG3Q96C92 435 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 SCAF8Q9UPN6 1271 aaKnown RBP12.72□□□□□ -0.37
TSPAN9-201ENST00000011898 RNF103-CHMP3A0A140T963 221 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 ESRRBO95718 433 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 DSG1Q02413 1049 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 STAT4Q14765 748 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 IZUMO2Q6UXV1 221 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 TSEN2Q8NCE0 465 aaKnown RBP12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 TMBIM4Q9HC24 238 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 SLC9A2Q9UBY0 812 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 F8VZ95 297 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 DGAT1O75907 488 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 KRT37O76014 449 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 CLPTM1O96005 669 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 BAATQ14032 418 aaPredicted RBP12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 SLC13A5Q86YT5 568 aaPredicted RBP12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 SLC35C1Q96A29 364 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 C18orf8Q96DM3 657 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 CFAP36Q96G28 342 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 MAML3Q96JK9 1138 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 PCDHB2Q9Y5E7 798 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 HEY1Q9Y5J3 304 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 SHMT1P34896 483 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 RAP1GDS1P52306 607 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 IYDQ6PHW0 289 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 C4orf32Q8N8J7 132 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 FAF2Q96CS3 445 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 CBWD1Q9BRT8 395 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 PARVAQ9NVD7 372 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 R3HDM2Q9Y2K5 976 aaKnown RBP12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
TSPAN9-201ENST00000011898 P4HA2O15460 535 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 ERVK-9P63128 1117 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 KCNJ2P63252 427 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 LRRC55Q6ZSA7 311 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 OMA1Q96E52 524 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 MED15Q96RN5 788 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 OSBPL8Q9BZF1 889 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 ATXN10Q9UBB4 475 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 UBE4BO95155 1302 aa12.71□□□□□ -0.38
TSPAN9-201ENST00000011898 HNRNPCL1O60812 293 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 FGRP09769 529 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ARP10275 920 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 TFDP2Q14188 446 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 AFAP1L2Q8N4X5 818 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 PSPC1Q8WXF1 523 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ING2Q9H160 280 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ZNF302Q9NR11 478 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 GGA3Q9NZ52 723 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 STRIP2Q9ULQ0 834 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 SERPINI2O75830 405 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 CALB2P22676 271 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 PDZD4Q76G19 769 aaPredicted RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 EXOC8Q8IYI6 725 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 C17orf50Q8WW18 174 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms