RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Foxn1Q61575 648 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 NfrkbQ6PIJ4 1296 aaKnown RBP11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Moxd2Q7TT41 619 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Arhgap29Q8CGF1 1266 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Syf2Q9D198 242 aaKnown RBP11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Cyp3a44Q9EQW4 504 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Ttc17E9PVB5 1198 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 A530032D15RikE9Q422 215 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Gucy1a2F8VQK3 730 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Ifi206G3UZV2 921 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Hcls1P49710 486 aaKnown RBP11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Atg16l2Q6KAU8 623 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Ints6Q6PCM2 883 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Trappc6aQ78XR0 159 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Elmo2Q8BHL5 732 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Reep2Q8VCD6 254 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Thap2Q9D305 217 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 3830403N18RikQ9D6C3 208 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Pdk2Q9JK42 407 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Morf4l2Q9R0Q4 288 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Bmp15Q9Z0L4 392 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Atp2c2A7L9Z8 944 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Gm3182K7N6T8 263 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Nr1i3O35627 358 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 BrafP28028 804 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Msx3P70354 204 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Irf6P97431 467 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 BC051142Q3V0M8 400 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Foxn3Q499D0 457 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 LbpQ61805 481 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Olfr1037Q7TR84 321 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Tlk1Q8C0V0 766 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Uap1Q91YN5 522 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 PmpcbQ9CXT8 489 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Dlgap1Q9D415 992 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Slc13a1Q9JHI4 594 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Nphs1Q9QZS7 1256 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 PfasQ5SUR0 1337 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 CfhP06909 1234 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Ms4a1P19437 291 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Gp1bbP56400 206 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Erbb2P70424 1256 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 IdsQ08890 552 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 SpertQ32MG2 446 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Rftn2Q8CHX7 500 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Abcb6Q9DC29 842 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Rimbp3Q3V0F0 1606 aa11.89□□□□□ -0.51
Chd3-202ENSMUST00000108661 Atp8b5A3FIN4 1183 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Card6E9PWH2 1175 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 TpbpaP13438 124 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Pla2g6P97819 807 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Tespa1Q3U132 458 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Srbd1Q497V5 1015 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Tfdp2Q64163 446 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Mov10l1Q99MV5 1187 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Mrfap1Q9CQL7 125 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 CoblQ5NBX1 1337 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Sec22bO08547 215 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 C6.1alQ7M757 291 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Fnip2Q80TD3 1108 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Llgl1Q80Y17 1036 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Mrpl47Q8K2Y7 252 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Rfc5Q9D0F6 339 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Sfmbt1Q9JMD1 863 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Htatip2Q9Z2G9 242 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Dhx35A2ACQ1 703 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Gm5861F6VCN9 180 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 4933402N22RikF7D1B3 190 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 PtprcP06800 1291 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Zfy1P10925 782 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 HpdP49429 393 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Slc1a1P51906 523 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Colec11Q3SXB8 272 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Hist2h2acQ64523 129 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Hist2h2aa1Q6GSS7 130 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Raver2Q7TPD6 673 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Thoc5Q8BKT7 683 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Gimap4Q99JY3 219 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Kif1aP33173 1695 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Serpina3jD3Z451 420 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Zfp277E9Q6D6 583 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Top3aO70157 1003 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Fcer2P20693 331 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 CremP27699 357 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Kcnj5P48545 419 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 IgfalsP70389 603 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Tcp11Q01755 566 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Tsr1Q5SWD9 803 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Vil1Q62468 827 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 HpgdQ8VCC1 269 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Myo1hQ9D6A1 958 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Adgrf5G5E8Q8 1348 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Gm1141B9EJU1 475 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Lzts1P60853 599 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Q6GQV0 436 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Dnajc8Q6NZB0 253 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 PapolgQ6PCL9 739 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Pdk1Q8BFP9 434 aaKnown RBP11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 Dyrk4Q8BI55 632 aa11.88□□□□□ -0.51
Chd3-202ENSMUST00000108661 LgsnQ8CIX8 563 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms