RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Celf2Q9Z0H4 508 aaKnown RBP12.93□□□□□ -0.34
Actb-201ENSMUST00000100497 Cntnap5aQ0V8T9 1304 aa12.93□□□□□ -0.34
Actb-201ENSMUST00000100497 Cntnap4Q99P47 1310 aa12.93□□□□□ -0.34
Actb-201ENSMUST00000100497 Tbc1d16A2ABG4 766 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Olfr1305A2AVW3 312 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Gm4846B2RWH8 538 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Srsf11E9Q6E5 511 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Klc1O88447 541 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Rpl7aP12970 266 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Krt19P19001 403 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Zfp42P22227 288 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Zhx1P70121 873 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Smyd1P97443 490 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Ppm1jQ149T7 507 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Wdr44Q6NVE8 915 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Zswim6Q80TB7 1207 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Daam2Q80U19 1115 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Pi4kbQ8BKC8 816 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Mical2Q8BML1 960 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Slc9a4Q8BUE1 797 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Cfap36Q8C6E0 343 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Lonp1Q8CGK3 949 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Fam133bQ9CVI2 245 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Pold3Q9EQ28 462 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Cyp39a1Q9JKJ9 470 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Nfu1Q9QZ23 255 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Fam171a1A2ATK9 892 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Gm16430A6X8J1 155 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Lonrf1D3YY23 762 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Hsd17b14E9Q3D4 273 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 F6Y6L6 278 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Gm3371F7CQW8 167 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Pcdh9F8VPK8 1237 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Kpna6O35345 536 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Trappc3O55013 180 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Shoc2O88520 582 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Mtco1P00397 514 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Krt8P11679 490 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Rab20P35295 233 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Msh2P43247 935 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Pde1bQ01065 535 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 VcpQ01853 806 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Col9a2Q07643 688 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Snx25Q3ZT31 840 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Etaa1Q5SVT3 877 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 CpQ61147 1061 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 RubcnQ80U62 956 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Agap1Q8BXK8 857 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Fam160b1Q8CDM8 764 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Bclaf1Q8K019 919 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Zdhhc3Q8R173 299 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 MgarpQ8VI64 283 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Mcrs1Q99L90 462 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 TtpalQ9D3D0 343 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Hsf2bpQ9D4G2 338 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Slxl1Q9D515 155 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Ascc1Q9D8Z1 356 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Upf1Q9EPU0 1124 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Prl2a1Q9JHK0 228 aa12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Atp6v0a1Q9Z1G4 839 aaKnown RBP12.92□□□□□ -0.34
Actb-201ENSMUST00000100497 Usp35M0QWN7 1009 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Cyp2f2P33267 491 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Ercc5P35689 1170 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Tbxas1P36423 533 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 PtpreP49446 699 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Mark2Q05512 776 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Ugt1a1Q63886 535 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Gpr156Q6PCP7 798 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Olfr670Q7TRP3 312 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Crybg3Q80W49 1005 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Wdtc1Q80ZK9 677 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Enoph1Q8BGB7 257 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Lrrc24Q8BHA1 521 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Dnali1Q8BVN8 258 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Elmo3Q8BYZ7 720 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Kcnv1Q8BZN2 503 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Usp27Q8CEG8 438 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Btbd6Q8K2J9 488 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Tm4sf4Q91XD3 202 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Dhx58Q99J87 678 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Pramef12Q9D2F1 463 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 1700109H08RikQ9D9C0 210 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Tmco5aQ9D9D5 303 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Rab27aQ9ERI2 221 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Znhit2Q9QY66 399 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Krt71Q9R0H5 524 aa12.91□□□□□ -0.34
Actb-201ENSMUST00000100497 Vmn2r1O70410 912 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Aff1O88573 1216 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 PtprcP06800 1291 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Uchl4P58321 233 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Mgat3Q10470 538 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Elf3Q3UPW2 391 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Slc30a9Q5IRJ6 567 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Mief2Q5NCS9 454 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Zbtb17Q60821 794 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 HarsQ61035 509 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Plk4Q64702 925 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 NostrinQ6WKZ7 506 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Spata20Q80YT5 790 aa12.9□□□□□ -0.34
Actb-201ENSMUST00000100497 Vmn2r43Q80Z08 845 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms