RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Pex3Q9QXY9 372 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Clec4aQ9QZ15 238 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gpc1Q9QZF2 557 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Taf7Q9R1C0 341 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Hic1Q9R1Y5 733 aa10.2□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Usp31E9Q6Y8 1344 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Map7d3A2AEY4 876 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pgrmc1O55022 195 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Uhmk1P97343 419 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pag1Q3U1F9 429 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 RasefQ5RI75 627 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam170aQ66LM6 333 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Exoc3l4Q6DIA2 721 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Edrf1Q6GQV7 1239 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Jade3Q6IE82 823 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Znf365Q8BG89 408 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pcmtd2Q8BHD8 359 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Znf385bQ8BXJ8 482 aaKnown RBP10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 PigwQ8C398 503 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc24a3Q99PD7 645 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mrpl11Q9CQF0 192 aaKnown RBP10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Galnt15Q9D2N8 638 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam84aQ9D650 292 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 EhhadhQ9DBM2 718 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 AfdnQ9QZQ1 1820 aaKnown RBP10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dip2bQ3UH60 1574 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Myh3P13541 1940 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gm7682A0A0J9YUM1 481 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lrrc74aA0A1Y7VMD6 494 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 A0A286YCQ6 122 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ckmt1P30275 418 aaKnown RBP10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Bop1P97452 732 aaKnown RBP10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trappc9Q3U0M1 1148 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 CamkvQ3UHL1 512 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Kansl1lQ5DTI6 991 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lrrc8bQ5DU41 803 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Il17raQ60943 864 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam214aQ69ZK7 1075 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Otud6aQ6IE21 290 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tmtc4Q8BG19 741 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tigd4Q8BUZ3 513 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Arhgap25Q8BYW1 648 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ttc16Q8C1F5 767 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Znf276Q8CE64 614 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pop1Q8K205 1045 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sgms1Q8VCQ6 419 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Snf8Q9CZ28 258 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam227aQ9D3V8 625 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sdr42e1Q9D665 394 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sun1Q9D666 913 aaKnown RBP10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 NplQ9DCJ9 320 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Il20Q9JKV9 176 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dpp6Q9Z218 804 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Akap11E9Q777 1895 aa10.19□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lrrc32G3XA59 663 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rc3h2P0C090 1187 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 LdhbP16125 334 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 DckP43346 260 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dpcr1Q3TNW5 500 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tmem63bQ3TWI9 832 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Zmym5Q3U2E2 627 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Muc3aQ3U5A2 218 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gm29609Q3UU56 907 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 LrmpQ60664 539 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gstt1Q64471 240 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Atg4cQ811C2 458 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ptbp3Q8BHD7 523 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mrps35Q8BJZ4 320 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gtf3c2Q8BL74 907 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Clasp2Q8BRT1 1286 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Apol9bQ8C7I4 310 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Apol9aQ8VDU3 310 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc25a3Q8VEM8 357 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Q922M7 232 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ciao1Q99KN2 339 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Paqr5Q9DCU0 330 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Hcar2Q9EP66 360 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cpb2Q9JHH6 422 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Habp4Q9JKS5 411 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tnfrsf10bQ9QZM4 381 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tpk1Q9R0M5 243 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 MypnQ5DTJ9 1315 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pramef25A2ASI9 494 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Speer4dL7N216 212 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Eya2O08575 532 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Atp6v0d1P51863 351 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 AdprhP54923 362 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Serpina1dQ00897 413 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gcnt1Q09324 428 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Vps51Q3UVL4 782 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Srek1ip1Q4V9W2 153 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Kctd8Q50H33 476 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 DstykQ6XUX1 927 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sox11Q7M6Y2 395 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cyfip1Q7TMB8 1253 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tmc7Q8C428 726 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 MgarpQ8VI64 283 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Isoc1Q91V64 297 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Eid1Q9DCR4 169 aa10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Hes6Q9JHE6 224 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms