RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Snf8Q9CZ28 258 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gtf2h1Q9DBA9 547 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Cables1Q9ESJ1 568 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Pard6bQ9JK83 371 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Sgk1Q9WVC6 431 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm44G3UW88 330 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 GzmgP13366 248 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ets2P15037 468 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Oprl1P35377 367 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rps12P63323 132 aaKnown RBP11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Smarcad1Q04692 1021 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Nsun2Q1HFZ0 757 aaKnown RBP11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 GmncQ3URY2 333 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Syne3Q4FZC9 975 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Spdye4aQ5IBH6 268 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Cnot7Q60809 285 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Dnajc8Q6NZB0 253 aaKnown RBP11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rhot1Q8BG51 631 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Osbpl2Q8BX94 484 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ccser1Q8C0C4 895 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 C8aQ8K182 587 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ero1aQ8R180 464 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Lpin3Q99PI4 848 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tmod2Q9JKK7 351 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Usp21Q9QZL6 566 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Mta2Q9R190 668 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Abcb11Q9QY30 1321 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm28360A0A087WR25 190 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 AspgA0JNU3 564 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Btg3P50615 252 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Dynlt1P51807 113 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Adamts10P58459 1104 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Crybg3Q80W49 1005 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 B3glctQ8BHT6 489 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Azin2Q8BVM4 459 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Zfp120Q8BZW4 436 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Plekhh3Q8VCE9 796 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ccdc65Q8VHI7 493 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rpn1Q91YQ5 608 aaKnown RBP11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gdap2Q9DBL2 498 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Mpp2Q9WV34 552 aa11.22□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Lonrf2B2RT44 518 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 GclmO09172 274 aaKnown RBP11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 AgxtO35423 414 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Impa1O55023 277 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Pias1O88907 651 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Sesn2P58043 480 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Smad1P70340 465 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Shox2P70390 331 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rsrp1Q3UC65 298 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm29609Q3UU56 907 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 JrkQ60976 557 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gtf3c2Q8BL74 907 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Man2a2Q8BRK9 1152 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 AgpsQ8C0I1 645 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Sh3rf3Q8C120 878 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tbl3Q8C4J7 801 aaKnown RBP11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Prpf31Q8CCF0 499 aaKnown RBP11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rassf3Q99P51 232 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Noc2lQ9WV70 747 aaKnown RBP11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Mtmr1Q9Z2C4 669 aa11.21□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 2210011C24RikA0A087WQ89 206 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Has3O08650 554 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Mmp10O55123 476 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 SfnO70456 248 aaKnown RBP11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 RarbP22605 482 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 CitP49025 2055 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Kcnn2P58390 839 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Pi4k2aQ2TBE6 479 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Arhgap17Q3UIA2 846 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Cyp2j11Q3UNV2 504 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Q3UTZ3 580 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Arhgef18Q6P9R4 1021 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Q80WR5 230 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Znf76Q8BMU0 568 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Taf5Q8C092 801 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Rab44Q8CB87 725 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Tubgcp4Q9D4F8 667 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 IkbipQ9DBZ1 373 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Trem1Q9JKE2 230 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Krt27Q9Z320 448 aa11.21□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Rabgap1A2AWA9 1064 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Fam47eD3YWC7 402 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 D830030K20RikE9PYQ5 218 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gm44503E9PYU5 387 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gm3043K7N693 218 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gm16440K7N6G6 218 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gm2244L7N2A3 218 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gm3278L7N2D2 218 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gm8271L7N2E2 218 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Hoxc13P50207 328 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 SftpbP50405 377 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Nat8lQ3UGX3 299 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Ppp1r12cQ3UMT1 782 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Tmc8Q7TN58 722 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Cpa1Q7TPZ8 419 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Camta2Q80Y50 1208 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Gga1Q8R0H9 635 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 Rpp40Q8R1F9 363 aa11.2□□□□□ -0.62
Ptcd1-201ENSMUST00000031628 BrdtQ91Y44 956 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms