RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Usp34Q6ZQ93 3582 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tbkbp1A2A9T0 611 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Pate3B3GLJ3 98 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Scgb2b7D3YYY1 112 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ttc17E9PVB5 1198 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Akr1b10G5E895 316 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gm17535J3KMR8 224 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gap43P06837 227 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ass1P16460 412 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gjb3P28231 270 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Irs1P35569 1233 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 EdnrbP48302 442 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mxi1P50540 228 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Cul4aQ3TCH7 759 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ndst1Q3UHN9 882 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Hsph1Q61699 858 aaKnown RBP8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Birc2Q62210 612 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Znf512Q69Z99 562 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Micall1Q8BGT6 870 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Q8C1R3 189 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Lrrc56Q8K375 552 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Dnajc28Q8VCE1 385 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Slc39a3Q99K24 317 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Abcf2Q99LE6 628 aaKnown RBP8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ddx47Q9CWX9 455 aaKnown RBP8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Syf2Q9D198 242 aaKnown RBP8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gtf2h1Q9DBA9 547 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Rmdn1Q9DCV4 305 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 PollQ9QXE2 573 aaKnown RBP8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Maged1Q9QYH6 775 aaKnown RBP8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ptgdr2Q9Z2J6 382 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ttc6G3UYY4 1857 aa8.25□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Veph1A1A535 833 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup10A2BIN1 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup14A2CEK7 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup19A9C497 187 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup15A9R9W0 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup17B5X0G2 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup8E9PVW0 235 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup7E9QA79 235 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Spata31E9QAF0 1014 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Rdh7O88451 316 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup6P02762 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup1P11588 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mup2P11589 180 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Cyp2b9P12790 491 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 ZfxP17012 799 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Acsl1P41216 699 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Pcsk1P63239 753 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Smad1P70340 465 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Smarcad1Q04692 1021 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Cntnap5bQ0V8T8 1292 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tex35Q14BK3 207 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Znf865Q3U3I9 1058 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Lilrb4Q64281 335 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 OcrlQ6NVF0 900 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Slc45a1Q8BIV7 751 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gtpbp10Q8K013 366 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Kctd15Q8K0E1 283 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Trib2Q8K4K3 343 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Twf1Q91YR1 350 aaKnown RBP8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Rexo2Q9D8S4 237 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tmco5aQ9D9D5 303 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tnfrsf18O35714 228 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Dsg3O35902 993 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 GlrbP48168 496 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Sox13Q04891 613 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Zmym1Q3TJB1 983 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Rbm20Q3UQS8 1199 aaKnown RBP8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tcf4Q60722 670 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Ppp2r5eQ61151 467 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Atg9bQ6EBV9 922 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Fsd1lQ8BYN5 507 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tbc1d13Q8R3D1 400 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 GhdcQ99J23 532 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Chst12Q99LL3 419 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Zmat2Q9CPW7 199 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gtf3c6Q9D8P7 227 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Trpv2Q9WTR1 756 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Hoxd10P28359 340 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Aldh2P47738 519 aaKnown RBP8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Zhx1P70121 873 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Arl5cQ6P068 179 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Snx14Q8BHY8 964 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Sh3rf3Q8C120 878 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Brat1Q8C3R1 822 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Mcoln2Q8K595 566 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Tbc1d19Q8VDV7 526 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 PawrQ925B0 333 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Fam133bQ9CVI2 245 aaKnown RBP8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Q9D4A5 307 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 3830403N18RikQ9D6C3 208 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Iqcf1Q9D9K8 182 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Fut2Q9JL27 347 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Psme4Q5SSW2 1843 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Myo7aP97479 2215 aa8.24□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gm12394A2AKP6 982 aa8.23□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Gm5795E9PZN8 263 aa8.23□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Pitpnm1O35954 1243 aa8.23□□□□□ -1.09
Ccdc39-201ENSMUST00000029222 Cracr2aQ3UP38 310 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms