RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Grm1P97772 1199 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Nt5dc3Q3UHB1 546 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 SkiQ60698 725 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Mical2Q8BML1 960 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Ablim1Q8K4G5 861 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Haus3Q8QZX2 570 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Pcdha10Q91Y20 946 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tmod4Q9JLH8 345 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Clcn2Q9R0A1 908 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Prom1O54990 867 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tspyl1O88852 379 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tgfb2P27090 414 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Ndufs6P52503 116 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Irf3P70671 419 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Cdh8P97291 799 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Rcn1Q05186 325 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Lrch2Q3UMG5 773 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Cog3Q8CI04 820 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 PrccQ9EQC8 491 aaKnown RBP15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Il21rQ9JHX3 529 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 B4galt5Q9JMK0 388 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Nr1h3Q9Z0Y9 445 aa15.83■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Pcdh9F8VPK8 1237 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Zfp715G3X9T1 886 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Rgsl1H3BL40 1073 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 GzmgP13366 248 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Fgfr1P16092 822 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Gbp8Q2V6D6 525 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 HpseQ6YGZ1 535 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Q80ZQ3 298 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Syt15Q8C6N3 418 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Stxbp5Q8K400 1152 aaKnown RBP15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Trim60Q8VI40 466 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Epn3Q91W69 636 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Map4k3Q99JP0 894 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 CmasQ99KK2 432 aaKnown RBP15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Igf2bp3Q9CPN8 579 aaKnown RBP15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tubb1A2AQ07 451 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Apol8A2VDH7 339 aaKnown RBP15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Zfy1P10925 782 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Zfp42P22227 288 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Q32P12 615 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Elf1Q60775 612 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Taf2Q8C176 1104 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Dclre1bQ8C7W7 541 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Lamtor4Q8CF66 99 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Pcdha3Q91Y16 942 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Trpc5Q9QX29 975 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Plod3Q9R0E1 741 aa15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 PygmQ9WUB3 842 aaKnown RBP15.82■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Fam155bA2BDP1 471 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tatdn2B7ZNL9 783 aaKnown RBP15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Adgrf2E9Q4J9 644 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Trove2O08848 538 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tlk2O55047 718 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Shoc2O88520 582 aaKnown RBP15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Tnnc2P20801 160 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 GckP52792 465 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Psmc1P62192 440 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Plk1Q07832 603 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Fam83hQ148V8 1209 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 GmncQ3URY2 333 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Trappc3lQ4KL14 181 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Klhl29Q80T74 875 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Cabs1Q8C633 391 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Inpp5fQ8CDA1 1132 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Adgrg2Q8CJ12 1009 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Cntnap4Q99P47 1310 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Gm16430A6X8J1 155 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 RarbP22605 482 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Rfx2P48379 717 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Sesn2P58043 480 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Q3UE31 404 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Mylk3Q3UIZ8 795 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Grid1Q61627 1009 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Ddx55Q6ZPL9 600 aaKnown RBP15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 RnpepQ8VCT3 650 aaKnown RBP15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Socs4Q91ZA6 436 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Rin1Q921Q7 763 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Cdk9Q99J95 372 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Slxl1Q9D515 155 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Ctnnal1O88327 731 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 IapP03975 557 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Ugt1a2P70691 533 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 CiitaP79621 1155 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 PighQ5M9N4 188 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 A1cfQ5YD48 595 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Kif11Q6P9P6 1052 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Olfr670Q7TRP3 312 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Moxd2Q7TT41 619 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Q9CQC3 228 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Pcsk1nQ9QXV0 258 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Pdcd7Q9WTY1 482 aa15.81■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 SktA2AQ25 1946 aaKnown RBP15.8■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 PhipQ8VDD9 1821 aaKnown RBP15.8■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Ccdc170D3YXL0 722 aa15.8■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Dusp8O09112 663 aa15.8■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Snx3O70492 162 aa15.8■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 Sstr1P30873 391 aa15.8■□□□□ 0.12
Nkx3-1-201ENSMUST00000022646 YwhaeP62259 255 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms