RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Sh2d4bA6X942 431 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm5795E9PZN8 263 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rrm1P07742 792 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Muc3aQ3U5A2 218 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm14685Q52KH6 695 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 GmipQ6PGG2 971 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Phka2Q8BWJ3 1235 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ccdc134Q8C7V8 229 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Prkag2Q91WG5 566 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Nfs1Q9Z1J3 459 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Krt27Q9Z320 448 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Col5a2Q3U962 1497 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Osbpl7A2A716 963 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm5483B2RV77 97 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ccdc175E9PVB3 822 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm379J3QQ19 296 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Prl6a1O35257 230 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 CpQ61147 1061 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Nr2e1Q64104 385 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Prmt6Q6NZB1 378 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfr670Q7TRP3 312 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfr392Q7TRX6 312 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Chn2Q80XD1 332 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Znf365Q8BG89 408 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Exd1Q8CDF7 570 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sgms1Q8VCQ6 419 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tjap1Q9DCD5 539 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Phtf1Q9QZ09 761 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ly6iQ9WU67 134 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pck1Q9Z2V4 622 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Scgb2b21A0A087WQA9 112 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 2010300C02RikE9Q3M9 1175 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Zfp105G3X9I0 524 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Aff1O88573 1216 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 GzmgP13366 248 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 SelpQ01102 768 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Siah1bQ06985 282 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fam8a1Q3URQ4 399 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sema5aQ62217 1077 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gpatch2lQ6PE65 482 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tdpoz2Q717B2 364 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pih1h3bQ8C6P5 218 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cep57Q8CEE0 500 aa11.4□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm29133A0A1B0GT72 266 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Zmynd8A2A484 1235 aaKnown RBP11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Prdm12A2AJ77 365 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 EloblA6PWE0 161 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 PtenO08586 403 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 CcnoP0C242 352 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Serpinh1P19324 417 aaKnown RBP11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cd68P31996 326 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Asprv1Q09PK2 339 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tfe3Q64092 572 aaKnown RBP11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gpr156Q6PCP7 798 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fam160b1Q8CDM8 764 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 OgtQ8CGY8 1046 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Kct2Q8K201 259 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rpp40Q8R1F9 363 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Plekhh3Q8VCE9 796 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Atad3Q925I1 591 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmem206Q9D771 350 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 CtsfQ9R013 462 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mettl1Q9Z120 268 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Znf804aA2AKY4 1200 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sec14l1A8Y5H7 715 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Vmn2r63E9Q0K5 859 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm9268E9Q0M3 861 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Vmn2r62K7N712 859 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cbfa2t2O70374 594 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rag1P15919 1040 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Casp2P29594 452 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fen1P39749 378 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Stx2Q00262 289 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sult1d1Q3UZZ6 295 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ppp4r3cQ3V0Y1 813 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 UrgcpQ5NCI0 926 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gucy2gQ6TL19 1100 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 C6.1alQ7M757 291 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 TdrkhQ80VL1 560 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rhot1Q8BG51 631 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fsd1lQ8BYN5 507 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tbc1d19Q8VDV7 526 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rpn1Q91YQ5 608 aaKnown RBP11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 TarsQ9D0R2 722 aaKnown RBP11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Scgb2b20Q9JI02 112 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Slc2a5Q9WV38 501 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Arih1Q9Z1K5 555 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Arrdc4A0A0B4J1F4 415 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 M6prP24668 278 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Eps15P42567 897 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cdo1P60334 200 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rad54lP70270 747 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Trim43bP86448 445 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gba2Q69ZF3 918 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Garem2Q6PAJ3 880 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 R3hdm2Q80TM6 1044 aaKnown RBP11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmco6Q8BQX5 494 aa11.39□□□□□ -0.59
Msh3-201ENSMUST00000022220 Znf638Q61464 1960 aaKnown RBP11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm1141B9EJU1 475 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Taf4E9QAP7 1042 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms