RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Snapc2Q91XA5 359 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Tbrg4Q91YM4 630 aaKnown RBP17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Rabgap1A2AWA9 1064 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Gnat1P20612 350 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Smyd1P97443 490 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 GsapQ3TCV3 858 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 B3gnt3Q5JCS9 372 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Sema5bQ60519 1093 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 LdhdQ7TNG8 484 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Frmd4aQ8BIE6 1020 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Q8R1Y2 203 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Wbp11Q923D5 641 aaKnown RBP17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Trim42Q9D2H5 723 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 B4galt5Q9JMK0 388 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Nr1h3Q9Z0Y9 445 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Mettl1Q9Z120 268 aa17.02■□□□□ 0.32
Trim28-201ENSMUST00000005705 Fam171a2A2A699 822 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Vwa5b1A9Z1V5 1215 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cyth2P63034 400 aaKnown RBP17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zbtb14Q08376 449 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 ArsiQ32KI9 573 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Syce2Q505B8 171 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Grb10Q60760 621 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Nlrp4eQ66X19 978 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zcwpw1Q6IR42 630 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 CenpuQ8C4M7 410 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cabs1Q8C633 391 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Taco1Q8K0Z7 294 aaKnown RBP17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Pnpt1Q8K1R3 783 aaKnown RBP17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Anapc7Q9WVM3 565 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Bub1bQ9Z1S0 1052 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Col2a1P28481 1487 aa17.02■□□□□ 0.31
Trim28-201ENSMUST00000005705 Serpinb3cA2RSF9 386 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 GclmO09172 274 aaKnown RBP17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cops5O35864 334 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 St3gal1P54751 337 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Sh3tc2Q80VA5 1289 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Emc2Q9CRD2 297 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Arhgef25Q9CWR0 618 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mageb3Q9D2H4 330 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Trpc3Q9QZC1 836 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Atrnl1Q6A051 1378 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 NumblO08919 604 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Pdcd2P46718 343 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Kpnb1P70168 876 aaKnown RBP17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 4933427I04RikQ3V053 235 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tbc1d22bQ80VE5 505 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tp53inp2Q8CFU8 221 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Wdr83Q9DAJ4 315 aaKnown RBP17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 Plod1Q9R0E2 728 aa17.01■□□□□ 0.31
Trim28-201ENSMUST00000005705 B020011L13RikA0A087WQI7 412 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 MipepA6H611 711 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Abcb5B5X0E4 1255 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zc3h7aE9PWW6 970 aaKnown RBP17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cdc25cP48967 447 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Il1rapl1P59823 695 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 YwhagP61982 247 aaKnown RBP17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Togaram2Q3TYG6 1002 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Srebf2Q3U1N2 1130 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Trip10Q8CJ53 603 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Abhd8Q8R0P8 439 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Olfr397Q8VEZ6 315 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Thap12Q9CUX1 758 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Abcg8Q9DBM0 673 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Clcn2Q9R0A1 908 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Klhl41A2AUC9 606 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Impa1O55023 277 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 PigrO70570 771 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 PkmP52480 531 aaKnown RBP17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Serping1P97290 504 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 GabpaQ00422 454 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Msx2Q03358 267 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Neurl1bQ0MW30 546 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Hace1Q3U0D9 909 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Hsph1Q61699 858 aaKnown RBP17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mapk4Q6P5G0 583 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Trpm4Q7TN37 1213 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gpr150Q8BL07 427 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gps1Q99LD4 471 aaKnown RBP17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rsc1a1Q9ER99 582 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 TrioQ0KL02 3102 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Grik3B1AS29 919 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Prdm15E9Q8T2 1174 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gja8P28236 440 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cdk16Q04735 496 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Luc7l3Q5SUF2 432 aaKnown RBP17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Slc17a8Q8BFU8 601 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Kbtbd13Q8C828 458 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Dync1li1Q8R1Q8 523 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Vmn1r199Q8R280 367 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cdk5rap3Q99LM2 503 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Arl8bQ9CQW2 186 aa17■□□□□ 0.31
Trim28-201ENSMUST00000005705 Dact3Q0PHV7 610 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 N4bp1Q6A037 893 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 OcrlQ6NVF0 900 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Orai3Q6P8G8 290 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Chn2Q80XD1 332 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mapk15Q80Y86 549 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rhot1Q8BG51 631 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Prpf31Q8CCF0 499 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms