RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YNR073CP0CX09 502 aa2.18□□□□□ -2.06
SED5YLR026C TIM12P32830 109 aa2.18□□□□□ -2.06
SED5YLR026C LHP1P33399 275 aaKnown RBP2.18□□□□□ -2.06
SED5YLR026C RGI1P40043 161 aaPredicted RBP2.18□□□□□ -2.06
SED5YLR026C GCN20P43535 752 aaKnown RBP2.18□□□□□ -2.06
SED5YLR026C USE1P53146 245 aa2.18□□□□□ -2.06
SED5YLR026C CUS2P53830 285 aaPredicted RBP2.18□□□□□ -2.06
SED5YLR026C SPG4Q04438 115 aa2.18□□□□□ -2.06
SED5YLR026C YLR283WQ05867 314 aa2.18□□□□□ -2.06
SED5YLR026C SYC1Q08553 188 aaPredicted RBP2.18□□□□□ -2.06
SED5YLR026C YOR186WQ08560 144 aa2.18□□□□□ -2.06
SED5YLR026C RRS1Q08746 203 aaKnown RBP2.18□□□□□ -2.06
SED5YLR026C YCT1Q12235 531 aa2.18□□□□□ -2.06
SED5YLR026C MSW1P04803 379 aa2.17□□□□□ -2.06
SED5YLR026C RPS1BP23248 255 aaKnown RBP2.17□□□□□ -2.06
SED5YLR026C SUA7P29055 345 aaPredicted RBP2.17□□□□□ -2.06
SED5YLR026C ARC19P33204 171 aaKnown RBP2.17□□□□□ -2.06
SED5YLR026C NUF2P33895 451 aa2.17□□□□□ -2.06
SED5YLR026C MRPL17P36528 281 aa2.17□□□□□ -2.06
SED5YLR026C BFR1P38934 470 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SED5YLR026C SMX2P40204 77 aaKnown RBP2.17□□□□□ -2.06
SED5YLR026C NUP57P48837 541 aa2.17□□□□□ -2.06
SED5YLR026C YNR062CP53748 327 aa2.17□□□□□ -2.06
SED5YLR026C YDC1Q02896 317 aa2.17□□□□□ -2.06
SED5YLR026C YDR391CQ04170 232 aa2.17□□□□□ -2.06
SED5YLR026C YPR098CQ06089 161 aa2.17□□□□□ -2.06
SED5YLR026C PAM18Q07914 168 aa2.17□□□□□ -2.06
SED5YLR026C MATALPHA1P0CY06 175 aa2.16□□□□□ -2.06
SED5YLR026C HMLALPHA1P0CY07 175 aa2.16□□□□□ -2.06
SED5YLR026C MRP1P10662 321 aaKnown RBP2.16□□□□□ -2.06
SED5YLR026C PPA2P28239 310 aa2.16□□□□□ -2.06
SED5YLR026C RNP1P32385 249 aa2.16□□□□□ -2.06
SED5YLR026C MSN4P33749 630 aa2.16□□□□□ -2.06
SED5YLR026C FMC1P40491 155 aa2.16□□□□□ -2.06
SED5YLR026C YGR201CP42936 225 aa2.16□□□□□ -2.06
SED5YLR026C RPA43P46669 326 aa2.16□□□□□ -2.06
SED5YLR026C TOS8P53147 276 aa2.16□□□□□ -2.06
SED5YLR026C DIG2Q03373 323 aaKnown RBP2.16□□□□□ -2.06
SED5YLR026C DML1Q03652 475 aa2.16□□□□□ -2.06
SED5YLR026C PEX12Q04370 399 aa2.16□□□□□ -2.06
SED5YLR026C YLR179CQ06252 201 aaKnown RBP2.16□□□□□ -2.06
SED5YLR026C YOL131WQ08270 108 aa2.16□□□□□ -2.06
SED5YLR026C CCA1P21269 546 aa2.15□□□□□ -2.07
SED5YLR026C MRPL49P40858 161 aaPredicted RBP2.15□□□□□ -2.07
SED5YLR026C TIM11P81449 96 aaPredicted RBP2.15□□□□□ -2.07
SED5YLR026C BNA7Q04066 261 aa2.15□□□□□ -2.07
SED5YLR026C GPI17Q04080 534 aa2.15□□□□□ -2.07
SED5YLR026C YPR127WQ06494 345 aa2.15□□□□□ -2.07
SED5YLR026C EMC6Q12431 108 aa2.15□□□□□ -2.07
SED5YLR026C YKL018C-AQ3E7A7 99 aa2.15□□□□□ -2.07
SED5YLR026C YBL008W-AQ3E821 79 aa2.15□□□□□ -2.07
SED5YLR026C THP2O13539 261 aaKnown RBP2.14□□□□□ -2.07
SED5YLR026C RPC19P28000 142 aaKnown RBP2.14□□□□□ -2.07
SED5YLR026C YBR063CP38083 404 aa2.14□□□□□ -2.07
SED5YLR026C MPC1P53157 130 aaKnown RBP2.14□□□□□ -2.07
SED5YLR026C MED4Q12343 284 aa2.14□□□□□ -2.07
SED5YLR026C PHO85P17157 305 aa2.13□□□□□ -2.07
SED5YLR026C NTF2P33331 125 aaKnown RBP2.13□□□□□ -2.07
SED5YLR026C MSA2P36157 363 aa2.13□□□□□ -2.07
SED5YLR026C CUE1P38428 203 aa2.13□□□□□ -2.07
SED5YLR026C FIP1P45976 327 aa2.13□□□□□ -2.07
SED5YLR026C OST2P46964 130 aa2.13□□□□□ -2.07
SED5YLR026C YGL159WP53110 370 aa2.13□□□□□ -2.07
SED5YLR026C GET1P53192 235 aa2.13□□□□□ -2.07
SED5YLR026C ARR2Q06597 130 aa2.13□□□□□ -2.07
SED5YLR026C MHF2Q3E829 80 aa2.13□□□□□ -2.07
SED5YLR026C STE18P18852 110 aa2.12□□□□□ -2.07
SED5YLR026C ASF2P32448 525 aaPredicted RBP2.12□□□□□ -2.07
SED5YLR026C DOA4P32571 926 aa2.12□□□□□ -2.07
SED5YLR026C RTC3P38804 111 aaPredicted RBP2.12□□□□□ -2.07
SED5YLR026C RMD6P39975 231 aa2.12□□□□□ -2.07
SED5YLR026C CCC1P47818 322 aa2.12□□□□□ -2.07
SED5YLR026C YGL235WP53071 178 aa2.12□□□□□ -2.07
SED5YLR026C YPL067CQ02754 198 aa2.12□□□□□ -2.07
SED5YLR026C YDR248CQ03786 193 aa2.12□□□□□ -2.07
SED5YLR026C COX5BP00425 151 aa2.11□□□□□ -2.07
SED5YLR026C SIR2P06700 562 aa2.11□□□□□ -2.07
SED5YLR026C YOL162WP0CF19 215 aa2.11□□□□□ -2.07
SED5YLR026C AUA1P32450 94 aa2.11□□□□□ -2.07
SED5YLR026C RCN1P36054 211 aa2.11□□□□□ -2.07
SED5YLR026C SRP102P36057 244 aaPredicted RBP2.11□□□□□ -2.07
SED5YLR026C FZO1P38297 855 aa2.11□□□□□ -2.07
SED5YLR026C MTW1P39731 289 aa2.11□□□□□ -2.07
SED5YLR026C YER085CP40058 173 aa2.11□□□□□ -2.07
SED5YLR026C NUP49Q02199 472 aa2.11□□□□□ -2.07
SED5YLR026C FAR8Q05040 523 aa2.11□□□□□ -2.07
SED5YLR026C NSL1Q12143 216 aa2.11□□□□□ -2.07
SED5YLR026C YLR126CQ12288 251 aa2.11□□□□□ -2.07
SED5YLR026C YMR105W-AQ8TGS8 64 aa2.11□□□□□ -2.07
SED5YLR026C Q0255P03881 472 aa2.1□□□□□ -2.07
SED5YLR026C YHR212W-AP0CX91 67 aa2.1□□□□□ -2.07
SED5YLR026C TMA19P35691 167 aaKnown RBP2.1□□□□□ -2.07
SED5YLR026C PEX17P40155 199 aa2.1□□□□□ -2.07
SED5YLR026C TIR3P40552 269 aa2.1□□□□□ -2.07
SED5YLR026C YJR056CP47115 236 aa2.1□□□□□ -2.07
SED5YLR026C XPT1P47165 209 aa2.1□□□□□ -2.07
SED5YLR026C RNH202Q05635 350 aa2.1□□□□□ -2.07
SED5YLR026C HOR7Q05827 59 aa2.1□□□□□ -2.07
SED5YLR026C BBP1Q12365 385 aa2.1□□□□□ -2.07
SED5YLR026C YCR016WP25617 290 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms