RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	YCR023C	P25351	611 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	YAR064W	P39563	99 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	YIL102C	P40488	101 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	RIM9	Q04734	239 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	YNG1	Q08465	219 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	ODC2	Q99297	307 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	ATP15	P21306	62 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	RPL37B	P51402	88 aa	Known RBP	0.86	□□□□□ -2.27
NUP120	YKL057C	YNL033W	P53964	284 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	TLG1	Q03322	224 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	YBR220C	P38318	560 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	FIT2	Q08906	153 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	MEI4	P29467	408 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	TCA17	P32613	152 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	NRK1	P53915	240 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	YKR005C	Q02203	525 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	GAL83	Q04739	417 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	YOR072W	Q08486	104 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	FSF1	Q12029	327 aa	Known RBP	0.85	□□□□□ -2.27
NUP120	YKL057C	ADE1	P27616	306 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	DOC1	P53068	250 aa		0.85	□□□□□ -2.27
NUP120	YKL057C	MGT1	P26188	188 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	GPI14	P47088	403 aa	Known RBP	0.84	□□□□□ -2.27
NUP120	YKL057C	RPL37A	P49166	88 aa	Known RBP	0.84	□□□□□ -2.27
NUP120	YKL057C	RIF1	P29539	1916 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	HSP30	P25619	332 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	KDX1	P36005	433 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	SRL3	P36167	246 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	YDR249C	Q03787	373 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	YLR162W	Q06235	118 aa		0.84	□□□□□ -2.27
NUP120	YKL057C	YKL102C	P34249	101 aa		0.84	□□□□□ -2.28
NUP120	YKL057C	YEL067C	P39978	195 aa		0.84	□□□□□ -2.28
NUP120	YKL057C	PET191	Q02772	108 aa		0.84	□□□□□ -2.28
NUP120	YKL057C	APA2	P22108	325 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	AHC2	P25649	128 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	SMD3	P43321	101 aa	Known RBP	0.83	□□□□□ -2.28
NUP120	YKL057C	LIP1	Q03579	150 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	BPT1	P14772	1559 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	YPK9	Q12697	1472 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	SEC17	P32602	292 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	ARC19	P33204	171 aa	Known RBP	0.83	□□□□□ -2.28
NUP120	YKL057C	RFC2	P40348	353 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	POG1	P40473	351 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	YNL140C	P53910	189 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	DID2	P69771	204 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	RRP17	Q04031	235 aa	Predicted RBP	0.83	□□□□□ -2.28
NUP120	YKL057C	DNA2	P38859	1522 aa		0.83	□□□□□ -2.28
NUP120	YKL057C	SRP102	P36057	244 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP120	YKL057C	CIN5	P40917	295 aa		0.82	□□□□□ -2.28
NUP120	YKL057C	MZM1	Q03429	123 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP120	YKL057C	YHR212W-A	P0CX91	67 aa		0.82	□□□□□ -2.28
NUP120	YKL057C	OCH1	P31755	480 aa		0.82	□□□□□ -2.28
NUP120	YKL057C	YML079W	Q03629	201 aa		0.82	□□□□□ -2.28
NUP120	YKL057C	EGD2	P38879	174 aa	Known RBP	0.82	□□□□□ -2.28
NUP120	YKL057C	FMP32	P43557	207 aa		0.82	□□□□□ -2.28
NUP120	YKL057C	YHP1	Q04116	353 aa		0.82	□□□□□ -2.28
NUP120	YKL057C	HPT1	Q04178	221 aa	Known RBP	0.82	□□□□□ -2.28
NUP120	YKL057C	ALB1	P47019	175 aa	Predicted RBP	0.81	□□□□□ -2.28
NUP120	YKL057C	YMR030W-A	Q3E760	96 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	RPL2A	P0CX45	254 aa	Known RBP	0.81	□□□□□ -2.28
NUP120	YKL057C	RPL2B	P0CX46	254 aa	Known RBP	0.81	□□□□□ -2.28
NUP120	YKL057C	YFL051C	P43552	160 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	YJR015W	P47090	510 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	RAV2	Q03956	351 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	RRT7	Q07829	113 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	HUT1	Q12520	339 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	YLR412C-A	Q3E742	68 aa		0.81	□□□□□ -2.28
NUP120	YKL057C	ARO80	Q04052	950 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	YOR015W	Q12169	119 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	MPD1	Q12404	318 aa	Known RBP	0.8	□□□□□ -2.28
NUP120	YKL057C	YIP3	P53633	176 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	YLR050C	Q12155	161 aa	Known RBP	0.8	□□□□□ -2.28
NUP120	YKL057C	YOR214C	Q12282	236 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	SNF2	P22082	1703 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	YLR460C	P54007	376 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	UBC7	Q02159	165 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	KEI1	Q06346	221 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	YPR127W	Q06494	345 aa		0.8	□□□□□ -2.28
NUP120	YKL057C	NVJ1	P38881	321 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	GPI17	Q04080	534 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	FIT1	Q04433	528 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	FCY1	Q12178	158 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	YHL018W	P38744	120 aa	Predicted RBP	0.79	□□□□□ -2.28
NUP120	YKL057C	YFL019C	P43576	117 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	YJL009W	P47078	108 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	YNL122C	P53921	115 aa	Predicted RBP	0.79	□□□□□ -2.28
NUP120	YKL057C	IRC20	Q06554	1556 aa		0.79	□□□□□ -2.28
NUP120	YKL057C	YPL229W	Q99395	206 aa		0.78	□□□□□ -2.28
NUP120	YKL057C	TIR1	P10863	254 aa		0.78	□□□□□ -2.28
NUP120	YKL057C	YER034W	P40022	185 aa	Known RBP	0.78	□□□□□ -2.28
NUP120	YKL057C	GIM5	Q04493	163 aa		0.78	□□□□□ -2.28
NUP120	YKL057C	FMP49	A0A023PZB3	126 aa		0.78	□□□□□ -2.29
NUP120	YKL057C	HYP2	P23301	157 aa	Known RBP	0.78	□□□□□ -2.29
NUP120	YKL057C	TDA4	P47153	279 aa		0.78	□□□□□ -2.29
NUP120	YKL057C	ATP19	P81451	68 aa		0.78	□□□□□ -2.29
NUP120	YKL057C	CNB1	P25296	175 aa		0.77	□□□□□ -2.29
NUP120	YKL057C	NUF2	P33895	451 aa		0.77	□□□□□ -2.29
NUP120	YKL057C	XPT1	P47165	209 aa		0.77	□□□□□ -2.29
NUP120	YKL057C	CWC27	Q02770	301 aa		0.77	□□□□□ -2.29
NUP120	YKL057C	ATG41	Q12048	136 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 112 ms