RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W YGL258W-AQ3E740 77 aa5.44□□□□□ -1.54
NUP49YGL172W RPP2AP05319 106 aaKnown RBP5.43□□□□□ -1.54
NUP49YGL172W YCR041WP37265 110 aa5.43□□□□□ -1.54
NUP49YGL172W PSD1P39006 500 aa5.43□□□□□ -1.54
NUP49YGL172W PHM8P40025 321 aa5.43□□□□□ -1.54
NUP49YGL172W COX15P40086 486 aa5.43□□□□□ -1.54
NUP49YGL172W YJL213WP40896 331 aa5.43□□□□□ -1.54
NUP49YGL172W SSU72P53538 206 aaPredicted RBP5.43□□□□□ -1.54
NUP49YGL172W PDR17P53844 350 aa5.43□□□□□ -1.54
NUP49YGL172W TRP4P07285 380 aaPredicted RBP5.42□□□□□ -1.54
NUP49YGL172W STF2P16965 84 aa5.42□□□□□ -1.54
NUP49YGL172W RTC3P38804 111 aaPredicted RBP5.42□□□□□ -1.54
NUP49YGL172W LST8P41318 303 aa5.42□□□□□ -1.54
NUP49YGL172W YJL163CP46996 555 aa5.42□□□□□ -1.54
NUP49YGL172W TIM11P81449 96 aaPredicted RBP5.42□□□□□ -1.54
NUP49YGL172W DCS1Q06151 350 aa5.42□□□□□ -1.54
NUP49YGL172W BER1Q06688 274 aaKnown RBP5.42□□□□□ -1.54
NUP49YGL172W YBR298C-AQ8TGK4 73 aa5.42□□□□□ -1.54
NUP49YGL172W FCY2P17064 533 aa5.41□□□□□ -1.54
NUP49YGL172W YPT31P38555 223 aaKnown RBP5.41□□□□□ -1.54
NUP49YGL172W WSS1P38838 269 aa5.41□□□□□ -1.54
NUP49YGL172W NSA2P40078 261 aaKnown RBP5.41□□□□□ -1.54
NUP49YGL172W HCH1P53834 153 aa5.41□□□□□ -1.54
NUP49YGL172W YMR082CQ04276 118 aa5.41□□□□□ -1.54
NUP49YGL172W COA4Q05809 96 aa5.41□□□□□ -1.54
NUP49YGL172W USV1Q12132 391 aa5.41□□□□□ -1.54
NUP49YGL172W POC4Q12245 148 aaPredicted RBP5.41□□□□□ -1.54
NUP49YGL172W AGC1Q12482 902 aa5.41□□□□□ -1.54
NUP49YGL172W YHR213W-AQ8TGT4 77 aa5.41□□□□□ -1.54
NUP49YGL172W SOD1P00445 154 aaKnown RBP5.4□□□□□ -1.54
NUP49YGL172W MRS3P10566 314 aa5.4□□□□□ -1.54
NUP49YGL172W ASP1P38986 381 aaPredicted RBP5.4□□□□□ -1.54
NUP49YGL172W GCV3P39726 170 aaPredicted RBP5.4□□□□□ -1.54
NUP49YGL172W YEA4P40004 342 aa5.4□□□□□ -1.54
NUP49YGL172W YDL186WP48568 277 aa5.4□□□□□ -1.54
NUP49YGL172W FRQ1Q06389 190 aa5.4□□□□□ -1.54
NUP49YGL172W YPS3Q12303 508 aa5.4□□□□□ -1.54
NUP49YGL172W ERG27Q12452 347 aaKnown RBP5.4□□□□□ -1.54
NUP49YGL172W RPS25BP0C0T4 108 aaKnown RBP5.4□□□□□ -1.55
NUP49YGL172W UPS2P35200 230 aa5.4□□□□□ -1.55
NUP49YGL172W MRPL38P35996 138 aaPredicted RBP5.4□□□□□ -1.55
NUP49YGL172W PRS4P38063 326 aaPredicted RBP5.4□□□□□ -1.55
NUP49YGL172W SPG4Q04438 115 aa5.4□□□□□ -1.55
NUP49YGL172W PBP4Q07362 185 aaKnown RBP5.4□□□□□ -1.55
NUP49YGL172W RKI1Q12189 258 aa5.4□□□□□ -1.55
NUP49YGL172W PRR2Q12310 699 aa5.4□□□□□ -1.55
NUP49YGL172W RPS25AQ3E792 108 aaPredicted RBP5.4□□□□□ -1.55
NUP49YGL172W ILV5P06168 395 aaKnown RBP5.39□□□□□ -1.55
NUP49YGL172W UBI4P0CG63 381 aaKnown RBP5.39□□□□□ -1.55
NUP49YGL172W YCR025CP25352 136 aa5.39□□□□□ -1.55
NUP49YGL172W INO2P26798 304 aa5.39□□□□□ -1.55
NUP49YGL172W YPS1P32329 569 aa5.39□□□□□ -1.55
NUP49YGL172W YNK1P36010 153 aaKnown RBP5.39□□□□□ -1.55
NUP49YGL172W YKL075CP36083 450 aa5.39□□□□□ -1.55
NUP49YGL172W GET2P40056 285 aa5.39□□□□□ -1.55
NUP49YGL172W HXT14P42833 540 aa5.39□□□□□ -1.55
NUP49YGL172W TAX4P47030 604 aa5.39□□□□□ -1.55
NUP49YGL172W IRC23Q08416 157 aa5.39□□□□□ -1.55
NUP49YGL172W PAA1Q12447 191 aaKnown RBP5.39□□□□□ -1.55
NUP49YGL172W EMP24P32803 203 aaKnown RBP5.38□□□□□ -1.55
NUP49YGL172W VPS55P47111 140 aa5.38□□□□□ -1.55
NUP49YGL172W BUL1P48524 976 aa5.38□□□□□ -1.55
NUP49YGL172W YHP1Q04116 353 aa5.38□□□□□ -1.55
NUP49YGL172W TDA6Q06466 467 aa5.38□□□□□ -1.55
NUP49YGL172W ARR3Q06598 404 aa5.38□□□□□ -1.55
NUP49YGL172W RAD28Q12021 506 aa5.38□□□□□ -1.55
NUP49YGL172W YBL071CP38185 102 aa5.37□□□□□ -1.55
NUP49YGL172W YAR068WP39564 161 aa5.37□□□□□ -1.55
NUP49YGL172W YGR269WP40326 108 aa5.37□□□□□ -1.55
NUP49YGL172W YJR015WP47090 510 aa5.37□□□□□ -1.55
NUP49YGL172W GLO1P50107 326 aa5.37□□□□□ -1.55
NUP49YGL172W ERG25P53045 309 aa5.37□□□□□ -1.55
NUP49YGL172W YML122CQ03207 126 aa5.37□□□□□ -1.55
NUP49YGL172W HOR7Q05827 59 aa5.37□□□□□ -1.55
NUP49YGL172W YDL242WQ07746 117 aa5.37□□□□□ -1.55
NUP49YGL172W YER190C-BP0CX94 160 aa5.36□□□□□ -1.55
NUP49YGL172W YEL077W-AP0CX95 160 aa5.36□□□□□ -1.55
NUP49YGL172W YGR296C-BP0CX96 160 aa5.36□□□□□ -1.55
NUP49YGL172W YPL283W-BP0CX97 160 aa5.36□□□□□ -1.55
NUP49YGL172W YPR204C-AP0CX98 160 aa5.36□□□□□ -1.55
NUP49YGL172W YFL068WP0CX99 160 aa5.36□□□□□ -1.55
NUP49YGL172W YLL066W-AP0CY00 160 aa5.36□□□□□ -1.55
NUP49YGL172W YLL067W-AP0CY01 160 aa5.36□□□□□ -1.55
NUP49YGL172W ELO2P25358 347 aa5.36□□□□□ -1.55
NUP49YGL172W YKL102CP34249 101 aa5.36□□□□□ -1.55
NUP49YGL172W QDR3P38227 689 aa5.36□□□□□ -1.55
NUP49YGL172W FIP1P45976 327 aa5.36□□□□□ -1.55
NUP49YGL172W YNR066CP53752 436 aa5.36□□□□□ -1.55
NUP49YGL172W MRPS17Q03246 237 aaPredicted RBP5.36□□□□□ -1.55
NUP49YGL172W YLR179CQ06252 201 aaKnown RBP5.36□□□□□ -1.55
NUP49YGL172W POS5Q06892 414 aa5.36□□□□□ -1.55
NUP49YGL172W FMP16Q12497 93 aa5.36□□□□□ -1.55
NUP49YGL172W SPO13P23624 291 aa5.35□□□□□ -1.55
NUP49YGL172W DOG2P38773 246 aa5.35□□□□□ -1.55
NUP49YGL172W DOG1P38774 246 aa5.35□□□□□ -1.55
NUP49YGL172W YIL077CP40508 320 aa5.35□□□□□ -1.55
NUP49YGL172W PHO23P50947 330 aa5.35□□□□□ -1.55
NUP49YGL172W CPD1P53314 239 aa5.35□□□□□ -1.55
NUP49YGL172W YMR181CQ03231 154 aa5.35□□□□□ -1.55
NUP49YGL172W RXT3Q07458 294 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 76.1 ms