RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W RIF1P29539 1916 aa3.33□□□□□ -1.88
DEG1YFL001W MOT1P32333 1867 aa3.33□□□□□ -1.88
DEG1YFL001W CDC8P00572 216 aa3.33□□□□□ -1.88
DEG1YFL001W MGT1P26188 188 aa3.33□□□□□ -1.88
DEG1YFL001W CLG1P35190 452 aa3.33□□□□□ -1.88
DEG1YFL001W SKG1P36169 355 aa3.33□□□□□ -1.88
DEG1YFL001W AME1P38313 324 aa3.33□□□□□ -1.88
DEG1YFL001W YER121WP40076 114 aa3.33□□□□□ -1.88
DEG1YFL001W ICE2P40499 491 aa3.33□□□□□ -1.88
DEG1YFL001W CCC1P47818 322 aa3.33□□□□□ -1.88
DEG1YFL001W MCP1Q12106 302 aa3.33□□□□□ -1.88
DEG1YFL001W SNF4P12904 322 aa3.32□□□□□ -1.88
DEG1YFL001W TRX3P25372 127 aa3.32□□□□□ -1.88
DEG1YFL001W GLE2P40066 365 aa3.32□□□□□ -1.88
DEG1YFL001W YGL088WP53151 121 aa3.32□□□□□ -1.88
DEG1YFL001W YMR315WQ04869 349 aaKnown RBP3.32□□□□□ -1.88
DEG1YFL001W YFR032C-BQ8TGU2 87 aa3.32□□□□□ -1.88
DEG1YFL001W MBF1O14467 151 aaKnown RBP3.31□□□□□ -1.88
DEG1YFL001W VMA11P32842 164 aa3.31□□□□□ -1.88
DEG1YFL001W YER137CP40083 148 aaKnown RBP3.31□□□□□ -1.88
DEG1YFL001W YPL225WQ08971 146 aaKnown RBP3.31□□□□□ -1.88
DEG1YFL001W RPB3P16370 318 aaKnown RBP3.3□□□□□ -1.88
DEG1YFL001W PET9P18239 318 aaKnown RBP3.3□□□□□ -1.88
DEG1YFL001W BET1P22804 142 aa3.3□□□□□ -1.88
DEG1YFL001W SCM4P32564 187 aa3.3□□□□□ -1.88
DEG1YFL001W MED6P38782 295 aa3.3□□□□□ -1.88
DEG1YFL001W AVT2P39981 480 aa3.3□□□□□ -1.88
DEG1YFL001W YOR283WQ12040 230 aaKnown RBP3.3□□□□□ -1.88
DEG1YFL001W YPR117WQ06116 2489 aa3.29□□□□□ -1.88
DEG1YFL001W RPL26AP05743 127 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W NHP6AP11632 93 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W URA5P13298 226 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W YCR090CP25654 182 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W MIG1P27705 504 aa3.29□□□□□ -1.88
DEG1YFL001W ARO7P32178 256 aa3.29□□□□□ -1.88
DEG1YFL001W SPO73P40031 143 aa3.29□□□□□ -1.88
DEG1YFL001W YER076CP40049 302 aa3.29□□□□□ -1.88
DEG1YFL001W MOB1P40484 314 aa3.29□□□□□ -1.88
DEG1YFL001W YKE4P40544 346 aa3.29□□□□□ -1.88
DEG1YFL001W FMP32P43557 207 aa3.29□□□□□ -1.88
DEG1YFL001W ARP3P47117 449 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W RPL26BP53221 127 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W RPL22BP56628 122 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W SWP1Q02795 286 aa3.29□□□□□ -1.88
DEG1YFL001W SPG3Q04398 127 aaPredicted RBP3.29□□□□□ -1.88
DEG1YFL001W YLR050CQ12155 161 aaKnown RBP3.29□□□□□ -1.88
DEG1YFL001W SCO1P23833 295 aa3.28□□□□□ -1.88
DEG1YFL001W PEX34P25584 144 aa3.28□□□□□ -1.88
DEG1YFL001W YBR242WP38331 238 aa3.28□□□□□ -1.88
DEG1YFL001W YLR053CQ12026 108 aa3.28□□□□□ -1.88
DEG1YFL001W MSW1P04803 379 aa3.27□□□□□ -1.89
DEG1YFL001W HSP30P25619 332 aa3.27□□□□□ -1.89
DEG1YFL001W SDH4P37298 181 aa3.27□□□□□ -1.89
DEG1YFL001W NVJ1P38881 321 aa3.27□□□□□ -1.89
DEG1YFL001W AIM18P38884 321 aa3.27□□□□□ -1.89
DEG1YFL001W LAA1P39526 2014 aa3.27□□□□□ -1.89
DEG1YFL001W EDC3P39998 551 aaKnown RBP3.27□□□□□ -1.89
DEG1YFL001W LSM4P40070 187 aaKnown RBP3.27□□□□□ -1.89
DEG1YFL001W RIO2P40160 425 aaKnown RBP3.27□□□□□ -1.89
DEG1YFL001W PRM10P42946 383 aa3.27□□□□□ -1.89
DEG1YFL001W SKI6P46948 246 aaPredicted RBP3.27□□□□□ -1.89
DEG1YFL001W ARO8P53090 500 aaKnown RBP3.27□□□□□ -1.89
DEG1YFL001W RCF2P53721 224 aa3.27□□□□□ -1.89
DEG1YFL001W YDC1Q02896 317 aa3.27□□□□□ -1.89
DEG1YFL001W YDR278CQ05612 105 aa3.27□□□□□ -1.89
DEG1YFL001W YPR127WQ06494 345 aa3.27□□□□□ -1.89
DEG1YFL001W EFG1Q3E705 233 aaKnown RBP3.27□□□□□ -1.89
DEG1YFL001W TSC3Q3E790 80 aa3.27□□□□□ -1.89
DEG1YFL001W PET20Q99373 253 aa3.27□□□□□ -1.89
DEG1YFL001W KIN28P06242 306 aa3.26□□□□□ -1.89
DEG1YFL001W CKS1P20486 150 aaKnown RBP3.26□□□□□ -1.89
DEG1YFL001W AHC2P25649 128 aa3.26□□□□□ -1.89
DEG1YFL001W FMP23P38231 175 aa3.26□□□□□ -1.89
DEG1YFL001W CYC2P38909 366 aa3.26□□□□□ -1.89
DEG1YFL001W SBH2P52871 88 aa3.26□□□□□ -1.89
DEG1YFL001W HNT1Q04344 158 aaKnown RBP3.26□□□□□ -1.89
DEG1YFL001W YLR031WQ07978 186 aa3.26□□□□□ -1.89
DEG1YFL001W PRM7Q12459 698 aa3.26□□□□□ -1.89
DEG1YFL001W VPS13Q07878 3144 aa3.26□□□□□ -1.89
DEG1YFL001W UBR2Q07963 1872 aa3.26□□□□□ -1.89
DEG1YFL001W TIM9O74700 87 aa3.25□□□□□ -1.89
DEG1YFL001W NMT1P14743 455 aa3.25□□□□□ -1.89
DEG1YFL001W ATP15P21306 62 aa3.25□□□□□ -1.89
DEG1YFL001W MRPL17P36528 281 aa3.25□□□□□ -1.89
DEG1YFL001W YEL028WP39989 153 aa3.25□□□□□ -1.89
DEG1YFL001W MNN5P46982 586 aa3.25□□□□□ -1.89
DEG1YFL001W YJL144WP47009 104 aa3.25□□□□□ -1.89
DEG1YFL001W YJR146WP47174 117 aa3.25□□□□□ -1.89
DEG1YFL001W DSK2P48510 373 aa3.25□□□□□ -1.89
DEG1YFL001W AIF1P52923 378 aa3.25□□□□□ -1.89
DEG1YFL001W DML1Q03652 475 aa3.25□□□□□ -1.89
DEG1YFL001W AIM34Q03673 198 aa3.25□□□□□ -1.89
DEG1YFL001W YLR422WQ06409 1932 aa3.25□□□□□ -1.89
DEG1YFL001W CCH1P50077 2039 aa3.25□□□□□ -1.89
DEG1YFL001W YHR180WP38868 163 aa3.24□□□□□ -1.89
DEG1YFL001W YJR111CP47148 283 aaKnown RBP3.24□□□□□ -1.89
DEG1YFL001W NUP49Q02199 472 aa3.24□□□□□ -1.89
DEG1YFL001W HPT1Q04178 221 aaKnown RBP3.24□□□□□ -1.89
DEG1YFL001W NEJ1Q06148 342 aa3.24□□□□□ -1.89
DEG1YFL001W SWC7Q06707 132 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms