RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W PHO85P17157 305 aa3.41□□□□□ -1.86
UBC6YER100W YOR062CP36025 268 aa3.41□□□□□ -1.86
UBC6YER100W PHO88P38264 188 aaPredicted RBP3.41□□□□□ -1.86
UBC6YER100W SPC25P40014 221 aa3.41□□□□□ -1.86
UBC6YER100W CUP9P41817 306 aa3.41□□□□□ -1.86
UBC6YER100W FKS1P38631 1876 aaKnown RBP3.41□□□□□ -1.86
UBC6YER100W NSP1P14907 823 aaKnown RBP3.4□□□□□ -1.87
UBC6YER100W SCL1P21243 252 aaKnown RBP3.4□□□□□ -1.87
UBC6YER100W TAF2P23255 1407 aa3.4□□□□□ -1.87
UBC6YER100W YNL217WP40152 326 aa3.4□□□□□ -1.87
UBC6YER100W YFR054CP43622 192 aa3.4□□□□□ -1.87
UBC6YER100W YNR077CP53758 84 aa3.4□□□□□ -1.87
UBC6YER100W YPD1Q07688 167 aa3.4□□□□□ -1.87
UBC6YER100W ATP20Q12233 115 aa3.4□□□□□ -1.87
UBC6YER100W YOR1P53049 1477 aa3.4□□□□□ -1.87
UBC6YER100W ATP5P09457 212 aa3.39□□□□□ -1.87
UBC6YER100W YBR209WP38311 105 aa3.39□□□□□ -1.87
UBC6YER100W CCC1P47818 322 aa3.39□□□□□ -1.87
UBC6YER100W GAL83Q04739 417 aa3.39□□□□□ -1.87
UBC6YER100W CPR5P35176 225 aa3.38□□□□□ -1.87
UBC6YER100W CYC2P38909 366 aa3.38□□□□□ -1.87
UBC6YER100W YGL204CP53089 101 aa3.38□□□□□ -1.87
UBC6YER100W YKR005CQ02203 525 aa3.38□□□□□ -1.87
UBC6YER100W CSN9Q03981 162 aa3.38□□□□□ -1.87
UBC6YER100W YLR236CA0A023PZG4 107 aa3.37□□□□□ -1.87
UBC6YER100W HSP30P25619 332 aa3.37□□□□□ -1.87
UBC6YER100W FZF1P32805 299 aa3.37□□□□□ -1.87
UBC6YER100W YGR201CP42936 225 aa3.37□□□□□ -1.87
UBC6YER100W VPS28Q02767 242 aa3.37□□□□□ -1.87
UBC6YER100W YMR253CQ04835 414 aa3.37□□□□□ -1.87
UBC6YER100W YMR320WQ04897 101 aa3.37□□□□□ -1.87
UBC6YER100W HRT1Q08273 121 aa3.37□□□□□ -1.87
UBC6YER100W RPC19P28000 142 aaKnown RBP3.36□□□□□ -1.87
UBC6YER100W SFK1P35735 353 aa3.36□□□□□ -1.87
UBC6YER100W YBR220CP38318 560 aa3.36□□□□□ -1.87
UBC6YER100W YPL073CP40323 161 aa3.36□□□□□ -1.87
UBC6YER100W FIP1P45976 327 aa3.36□□□□□ -1.87
UBC6YER100W ERG25P53045 309 aa3.36□□□□□ -1.87
UBC6YER100W RRT1P38192 103 aa3.35□□□□□ -1.87
UBC6YER100W YER181CP40097 107 aa3.35□□□□□ -1.87
UBC6YER100W YJR015WP47090 510 aa3.35□□□□□ -1.87
UBC6YER100W DIG2Q03373 323 aaKnown RBP3.35□□□□□ -1.87
UBC6YER100W CGI121Q03705 181 aaKnown RBP3.35□□□□□ -1.87
UBC6YER100W CUE4Q04201 117 aaPredicted RBP3.35□□□□□ -1.87
UBC6YER100W FYV12Q08559 129 aa3.35□□□□□ -1.87
UBC6YER100W RAD6P06104 172 aa3.34□□□□□ -1.87
UBC6YER100W YJL027CP47063 138 aaPredicted RBP3.34□□□□□ -1.87
UBC6YER100W SBH1P52870 82 aa3.34□□□□□ -1.87
UBC6YER100W GRX5Q02784 150 aa3.34□□□□□ -1.87
UBC6YER100W SYM1Q06563 197 aa3.34□□□□□ -1.87
UBC6YER100W HRD1Q08109 551 aa3.34□□□□□ -1.87
UBC6YER100W IRC23Q08416 157 aa3.34□□□□□ -1.87
UBC6YER100W DDI2P0CH63 225 aa3.33□□□□□ -1.88
UBC6YER100W DDI3P0CH64 225 aa3.33□□□□□ -1.88
UBC6YER100W TFC1P32367 649 aa3.33□□□□□ -1.88
UBC6YER100W PAM17P36147 197 aa3.33□□□□□ -1.88
UBC6YER100W YHR022CP38763 256 aa3.33□□□□□ -1.88
UBC6YER100W GAA1P39012 614 aa3.33□□□□□ -1.88
UBC6YER100W POP3P53833 195 aaPredicted RBP3.33□□□□□ -1.88
UBC6YER100W YNL033WP53964 284 aa3.33□□□□□ -1.88
UBC6YER100W PHB1P40961 287 aa3.32□□□□□ -1.88
UBC6YER100W MIX17Q03667 156 aa3.32□□□□□ -1.88
UBC6YER100W YDR102CQ03864 110 aa3.32□□□□□ -1.88
UBC6YER100W PST2Q12335 198 aaKnown RBP3.32□□□□□ -1.88
UBC6YER100W YOR381W-AQ3E804 55 aa3.32□□□□□ -1.88
UBC6YER100W VMA22P38784 181 aa3.31□□□□□ -1.88
UBC6YER100W AGE2P40529 298 aa3.31□□□□□ -1.88
UBC6YER100W YDR366CP87287 132 aa3.31□□□□□ -1.88
UBC6YER100W CYT2Q00873 224 aa3.31□□□□□ -1.88
UBC6YER100W COF1Q03048 143 aaKnown RBP3.31□□□□□ -1.88
UBC6YER100W SEC11P15367 167 aa3.3□□□□□ -1.88
UBC6YER100W UTR5P32630 166 aa3.3□□□□□ -1.88
UBC6YER100W HTD2P38790 280 aaKnown RBP3.3□□□□□ -1.88
UBC6YER100W TVP23P38962 199 aa3.3□□□□□ -1.88
UBC6YER100W YEL073CP39974 107 aa3.3□□□□□ -1.88
UBC6YER100W YEL028WP39989 153 aa3.3□□□□□ -1.88
UBC6YER100W PAC10P48363 199 aa3.3□□□□□ -1.88
UBC6YER100W SAY1P53324 424 aa3.3□□□□□ -1.88
UBC6YER100W YDR391CQ04170 232 aa3.3□□□□□ -1.88
UBC6YER100W YOR015WQ12169 119 aa3.3□□□□□ -1.88
UBC6YER100W TRM3Q07527 1436 aa3.29□□□□□ -1.88
UBC6YER100W PTC1P35182 281 aa3.29□□□□□ -1.88
UBC6YER100W YRA2P36036 203 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
UBC6YER100W KNH1P50112 268 aa3.29□□□□□ -1.88
UBC6YER100W RNH202Q05635 350 aa3.29□□□□□ -1.88
UBC6YER100W RAD28Q12021 506 aa3.29□□□□□ -1.88
UBC6YER100W ATP14Q12349 124 aa3.29□□□□□ -1.88
UBC6YER100W DSE2P38844 325 aa3.28□□□□□ -1.88
UBC6YER100W RIO2P40160 425 aaKnown RBP3.28□□□□□ -1.88
UBC6YER100W YGR039WP53225 103 aa3.28□□□□□ -1.88
UBC6YER100W DAD4P69851 72 aa3.28□□□□□ -1.88
UBC6YER100W ANT1Q06497 328 aa3.28□□□□□ -1.88
UBC6YER100W SUA7P29055 345 aaPredicted RBP3.27□□□□□ -1.89
UBC6YER100W MRPL24P36525 258 aaPredicted RBP3.27□□□□□ -1.89
UBC6YER100W UBC7Q02159 165 aa3.27□□□□□ -1.89
UBC6YER100W DML1Q03652 475 aa3.27□□□□□ -1.89
UBC6YER100W YPR013CQ12145 317 aa3.27□□□□□ -1.89
UBC6YER100W YLR361C-AQ3E795 98 aa3.27□□□□□ -1.89
UBC6YER100W MET5P47169 1442 aa3.27□□□□□ -1.89
UBC6YER100W PHO13P19881 312 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms