RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	RPL9B	P51401	191 aa	Known RBP	5.89	□□□□□ -1.47
CDC7	YDL017W	YAP1802	P53309	568 aa		5.89	□□□□□ -1.47
CDC7	YDL017W	DYN2	Q02647	92 aa		5.89	□□□□□ -1.47
CDC7	YDL017W	YMR007W	Q03675	126 aa		5.89	□□□□□ -1.47
CDC7	YDL017W	FRQ1	Q06389	190 aa		5.89	□□□□□ -1.47
CDC7	YDL017W	ARR3	Q06598	404 aa		5.89	□□□□□ -1.47
CDC7	YDL017W	RAD28	Q12021	506 aa		5.89	□□□□□ -1.47
CDC7	YDL017W	ATP10	P18496	279 aa		5.88	□□□□□ -1.47
CDC7	YDL017W	QDR3	P38227	689 aa		5.88	□□□□□ -1.47
CDC7	YDL017W	YPT31	P38555	223 aa	Known RBP	5.88	□□□□□ -1.47
CDC7	YDL017W	NSA2	P40078	261 aa	Known RBP	5.88	□□□□□ -1.47
CDC7	YDL017W	LOC1	P43586	204 aa	Predicted RBP	5.88	□□□□□ -1.47
CDC7	YDL017W	CRH1	P53301	507 aa		5.88	□□□□□ -1.47
CDC7	YDL017W	BOR1	P53838	576 aa		5.88	□□□□□ -1.47
CDC7	YDL017W	RAX2	Q12465	1220 aa		5.88	□□□□□ -1.47
CDC7	YDL017W	YOS1	Q3E834	85 aa		5.88	□□□□□ -1.47
CDC7	YDL017W	DAL80	P26343	269 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	COQ3	P27680	312 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	ACP1	P32463	125 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	ALK2	P32789	676 aa	Predicted RBP	5.87	□□□□□ -1.47
CDC7	YDL017W	ATP3	P38077	311 aa	Known RBP	5.87	□□□□□ -1.47
CDC7	YDL017W	YJR015W	P47090	510 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	FYV6	P53913	173 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	YNL046W	P53956	172 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	POM34	Q12445	299 aa		5.87	□□□□□ -1.47
CDC7	YDL017W	YBR056W-A	I2HB52	66 aa		5.86	□□□□□ -1.47
CDC7	YDL017W	SOR1	P35497	357 aa	Known RBP	5.86	□□□□□ -1.47
CDC7	YDL017W	YGP1	P38616	354 aa	Known RBP	5.86	□□□□□ -1.47
CDC7	YDL017W	CTR2	P38865	189 aa		5.86	□□□□□ -1.47
CDC7	YDL017W	TAX4	P47030	604 aa		5.86	□□□□□ -1.47
CDC7	YDL017W	SOR2	Q07786	357 aa		5.86	□□□□□ -1.47
CDC7	YDL017W	PET494	P07390	489 aa	Predicted RBP	5.85	□□□□□ -1.47
CDC7	YDL017W	MRS3	P10566	314 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	AFR1	P33304	620 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	MIA40	P36046	403 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	DER1	P38307	211 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	ECM14	P38836	430 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	HSP10	P38910	106 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	CMC2	Q3E7A4	109 aa		5.85	□□□□□ -1.47
CDC7	YDL017W	TRP4	P07285	380 aa	Predicted RBP	5.84	□□□□□ -1.47
CDC7	YDL017W	NHP6A	P11632	93 aa	Known RBP	5.84	□□□□□ -1.47
CDC7	YDL017W	NOP1	P15646	327 aa	Known RBP	5.84	□□□□□ -1.47
CDC7	YDL017W	YBR184W	P38299	523 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	GET2	P40056	285 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
CDC7	YDL017W	PUS4	P48567	403 aa	Known RBP	5.84	□□□□□ -1.47
CDC7	YDL017W	MIC27	P50945	234 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	YGL114W	P53134	725 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	ATC1	Q04005	294 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	SHH3	Q04487	196 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	YOP1	Q12402	180 aa		5.84	□□□□□ -1.47
CDC7	YDL017W	RPS22A	P0C0W1	130 aa	Known RBP	5.84	□□□□□ -1.48
CDC7	YDL017W	PAU19	P0CE85	124 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	PAU21	P0CE86	164 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	PAU22	P0CE87	164 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	TOM40	P23644	387 aa	Known RBP	5.84	□□□□□ -1.48
CDC7	YDL017W	PAU3	P25610	124 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	YNK1	P36010	153 aa	Known RBP	5.84	□□□□□ -1.48
CDC7	YDL017W	NOP16	P40007	231 aa	Known RBP	5.84	□□□□□ -1.48
CDC7	YDL017W	ATG27	P46989	271 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	LST7	P53237	242 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	SSU72	P53538	206 aa	Predicted RBP	5.84	□□□□□ -1.48
CDC7	YDL017W	STP4	Q07351	490 aa		5.84	□□□□□ -1.48
CDC7	YDL017W	FPR2	P32472	135 aa		5.83	□□□□□ -1.48
CDC7	YDL017W	PAU5	P43575	122 aa		5.83	□□□□□ -1.48
CDC7	YDL017W	YHP1	Q04116	353 aa		5.83	□□□□□ -1.48
CDC7	YDL017W	POS5	Q06892	414 aa		5.83	□□□□□ -1.48
CDC7	YDL017W	YMR316C-A	I2HB70	103 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	HTB1	P02293	131 aa	Known RBP	5.82	□□□□□ -1.48
CDC7	YDL017W	BGL2	P15703	313 aa	Known RBP	5.82	□□□□□ -1.48
CDC7	YDL017W	SPC29	P33419	253 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	ADH5	P38113	351 aa	Known RBP	5.82	□□□□□ -1.48
CDC7	YDL017W	IMD2	P38697	523 aa	Known RBP	5.82	□□□□□ -1.48
CDC7	YDL017W	PTC7	P38797	343 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	SUR2	P38992	349 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	YAR068W	P39564	161 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	YER121W	P40076	114 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	HIT1	P46973	164 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	DSK2	P48510	373 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	DAD3	P69850	94 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	ARL3	Q02804	198 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	SNA4	Q07549	140 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	LDS2	Q08218	356 aa		5.82	□□□□□ -1.48
CDC7	YDL017W	RNA15	P25299	296 aa	Predicted RBP	5.81	□□□□□ -1.48
CDC7	YDL017W	ALG14	P38242	237 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	CYB5	P40312	120 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	SAS2	P40963	338 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	GPI2	P46961	280 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	LOA1	Q06508	300 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	YPR063C	Q12160	140 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	YDL009C	Q12210	107 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	LAS17	Q12446	633 aa		5.81	□□□□□ -1.48
CDC7	YDL017W	FMP49	A0A023PZB3	126 aa		5.8	□□□□□ -1.48
CDC7	YDL017W	PIS1	P06197	220 aa	Known RBP	5.8	□□□□□ -1.48
CDC7	YDL017W	HMX1	P32339	317 aa		5.8	□□□□□ -1.48
CDC7	YDL017W	PMU1	P36069	295 aa		5.8	□□□□□ -1.48
CDC7	YDL017W	YGL185C	P53100	379 aa		5.8	□□□□□ -1.48
CDC7	YDL017W	YNR064C	P53750	290 aa		5.8	□□□□□ -1.48
CDC7	YDL017W	MIX17	Q03667	156 aa		5.8	□□□□□ -1.48
CDC7	YDL017W	YCL048W-A	Q2V2Q2	79 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms