RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	WSC2	P53832	503 aa		4.14	□□□□□ -1.75
ROT2	YBR229C	BOR1	P53838	576 aa		4.14	□□□□□ -1.75
ROT2	YBR229C	DMA2	P53924	522 aa		4.14	□□□□□ -1.75
ROT2	YBR229C	RAF1	Q06891	181 aa		4.14	□□□□□ -1.75
ROT2	YBR229C	YGL258W-A	Q3E740	77 aa		4.14	□□□□□ -1.75
ROT2	YBR229C	SRP21	P32342	167 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	YOX1	P34161	385 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	YEL057C	P39983	233 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	LIP2	Q06005	328 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	LOA1	Q06508	300 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	ATX2	Q12067	313 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	POC4	Q12245	148 aa	Predicted RBP	4.13	□□□□□ -1.75
ROT2	YBR229C	CPR5	P35176	225 aa		4.13	□□□□□ -1.75
ROT2	YBR229C	SEC16	P48415	2195 aa	Known RBP	4.13	□□□□□ -1.75
ROT2	YBR229C	RNA15	P25299	296 aa	Predicted RBP	4.12	□□□□□ -1.75
ROT2	YBR229C	YGL010W	P25338	174 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	DER1	P38307	211 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	PIC2	P40035	300 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	MHR1	Q06630	226 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	MCH1	Q07376	486 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	POR1	P04840	283 aa	Known RBP	4.12	□□□□□ -1.75
ROT2	YBR229C	SPS18	P32572	300 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	MRPL11	P36521	249 aa	Predicted RBP	4.12	□□□□□ -1.75
ROT2	YBR229C	CUE1	P38428	203 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	SHH3	Q04487	196 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	ECM18	Q04623	453 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	NAT3	Q06504	195 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	FYV7	Q12247	151 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	ERG27	Q12452	347 aa	Known RBP	4.12	□□□□□ -1.75
ROT2	YBR229C	ACC1	Q00955	2233 aa	Known RBP	4.12	□□□□□ -1.75
ROT2	YBR229C	HMX1	P32339	317 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	SRP14	P38985	146 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	UME6	P39001	836 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	GON7	P46984	123 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	SIP18	P50263	79 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	MIC27	P50945	234 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	DYN2	Q02647	92 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	YPL077C	Q02831	240 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	LPP1	Q04396	274 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	ARR2	Q06597	130 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	LDS2	Q08218	356 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	POM34	Q12445	299 aa		4.12	□□□□□ -1.75
ROT2	YBR229C	ATP5	P09457	212 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	FPR2	P32472	135 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	YJR015W	P47090	510 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	SMT3	Q12306	101 aa	Known RBP	4.11	□□□□□ -1.75
ROT2	YBR229C	RPB10	P22139	70 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	RPB11	P38902	120 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	SEC24	P40482	926 aa	Known RBP	4.11	□□□□□ -1.75
ROT2	YBR229C	RPN14	P53196	417 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	YOR105W	Q08504	108 aa		4.11	□□□□□ -1.75
ROT2	YBR229C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.11	□□□□□ -1.75
ROT2	YBR229C	RPL9A	P05738	191 aa	Known RBP	4.1	□□□□□ -1.75
ROT2	YBR229C	RPL35A	P0CX84	120 aa	Known RBP	4.1	□□□□□ -1.75
ROT2	YBR229C	RPL35B	P0CX85	120 aa	Known RBP	4.1	□□□□□ -1.75
ROT2	YBR229C	TOM40	P23644	387 aa	Known RBP	4.1	□□□□□ -1.75
ROT2	YBR229C	DAD2	P36162	133 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	YAR068W	P39564	161 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	SAS2	P40963	338 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	DSK2	P48510	373 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	SUA7	P29055	345 aa	Predicted RBP	4.1	□□□□□ -1.75
ROT2	YBR229C	TCA17	P32613	152 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	YKL102C	P34249	101 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	UBC13	P52490	153 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	MRL1	Q06815	381 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	RFM1	Q12192	310 aa		4.1	□□□□□ -1.75
ROT2	YBR229C	TRP4	P07285	380 aa	Predicted RBP	4.09	□□□□□ -1.75
ROT2	YBR229C	MRS3	P10566	314 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	ICS2	P38284	255 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	CPD1	P53314	239 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	RPL21A	Q02753	160 aa	Known RBP	4.09	□□□□□ -1.75
ROT2	YBR229C	POM33	Q12164	279 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	RPL21B	Q12672	160 aa	Known RBP	4.09	□□□□□ -1.75
ROT2	YBR229C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.09	□□□□□ -1.75
ROT2	YBR229C	HEM4	P06174	275 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	LDB16	P25587	256 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	QRI5	P32344	111 aa		4.09	□□□□□ -1.75
ROT2	YBR229C	RPL9B	P51401	191 aa	Known RBP	4.09	□□□□□ -1.75
ROT2	YBR229C	YBR184W	P38299	523 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	YIL163C	P40448	117 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	CDC40	P40968	455 aa	Predicted RBP	4.08	□□□□□ -1.76
ROT2	YBR229C	YJL118W	P47022	219 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	SAE3	P89114	91 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	GEP5	Q12393	293 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	HMRA1	P0CY11	126 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	STE4	P18851	423 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	SSU72	P53538	206 aa	Predicted RBP	4.08	□□□□□ -1.76
ROT2	YBR229C	IZH1	Q03419	316 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	HFA1	P32874	2273 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	RAD23	P32628	398 aa	Known RBP	4.08	□□□□□ -1.76
ROT2	YBR229C	GAT2	P40209	560 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	DUG3	P53871	357 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	YDR114C	Q04597	100 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	POS5	Q06892	414 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	RNH203	Q12338	110 aa		4.08	□□□□□ -1.76
ROT2	YBR229C	YMR316C-A	I2HB70	103 aa		4.07	□□□□□ -1.76
ROT2	YBR229C	SOD1	P00445	154 aa	Known RBP	4.07	□□□□□ -1.76
ROT2	YBR229C	PIS1	P06197	220 aa	Known RBP	4.07	□□□□□ -1.76
ROT2	YBR229C	RPS2	P25443	254 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms