RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CHST12Q9NRB3 414 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CNTN3Q9P232 1028 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CTTNBP2NLQ9P2B4 639 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 DNM1LO00429 736 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 ATMINO43313 823 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-219ENST00000641513 MED7O43513 233 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CKBP12277 381 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 NSFP46459 744 aaKnown RBP9.42□□□□□ -0.9
PHGDH-219ENST00000641513 HSP90B2PQ58FF3 399 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 EMBQ6PCB8 327 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 ALKAL1Q6UXT8 129 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 PHLDB2Q86SQ0 1253 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 DAAM2Q86T65 1068 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CREG2Q8IUH2 290 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 SYCE1Q8N0S2 351 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 UBR7Q8N806 425 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 TPCN2Q8NHX9 752 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 COG1Q8WTW3 980 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF606Q8WXB4 792 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 RFFLQ8WZ73 363 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CYFIP2Q96F07 1278 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 OSBPL9Q96SU4 736 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 ADAM2Q99965 735 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 OSBPL7Q9BZF2 842 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 SDCBP2Q9H190 292 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CNOT8Q9UFF9 292 aaKnown RBP9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CNTN6Q9UQ52 1028 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 CEP83Q9Y592 693 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 SNX9Q9Y5X1 595 aa9.42□□□□□ -0.9
PHGDH-219ENST00000641513 PPEF2O14830 753 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 SRGAP2O75044 1071 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 CAND2O75155 1236 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 TFRCP02786 760 aaKnown RBP9.41□□□□□ -0.9
PHGDH-219ENST00000641513 CFHP08603 1231 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 RHOXF2BP0C7M4 288 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 KCNE1P15382 129 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 MLH1P40692 756 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 PAFAH1B1P43034 410 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 RAB27AP51159 221 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF132P52740 706 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 RAD23BP54727 409 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 RPS6KA1Q15418 735 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 ZBTB6Q15916 424 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 TRIM71Q2Q1W2 868 aaKnown RBP9.41□□□□□ -0.9
PHGDH-219ENST00000641513 SV2CQ496J9 727 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 FAM26DQ5JW98 314 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 CCDC181Q5TID7 509 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 LIN9Q5TKA1 542 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 PEX26Q7Z412 305 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 TTC39CQ8N584 583 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 LRRC52Q8N7C0 313 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 USP38Q8NB14 1042 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 CXorf38Q8TB03 319 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 AENQ8WTP8 325 aaKnown RBP9.41□□□□□ -0.9
PHGDH-219ENST00000641513 CAVIN3Q969G5 261 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 PGBD4Q96DM1 585 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 FAXDC2Q96IV6 333 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 HEXIM2Q96MH2 286 aaKnown RBP9.41□□□□□ -0.9
PHGDH-219ENST00000641513 ZFP42Q96MM3 310 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 GAD1Q99259 594 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 PSMB7Q99436 277 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 RHOXF2Q9BQY4 288 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 C11orf70Q9BRQ4 267 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 NUP85Q9BW27 656 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 GOLPH3Q9H4A6 298 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 GOLGA2P5Q9HBQ8 144 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 OSGEPQ9NPF4 335 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 ADAM22Q9P0K1 906 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 AMFRQ9UKV5 643 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 PACSIN2Q9UNF0 486 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-219ENST00000641513 CENPFP49454 3210 aa9.41□□□□□ -0.9
PHGDH-219ENST00000641513 A6NNZ2 444 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 MEIS3P2A8K0S8 358 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF185O15231 689 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 MGEA5O60502 916 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-219ENST00000641513 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
PHGDH-219ENST00000641513 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
PHGDH-219ENST00000641513 THP07101 528 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 PAEPP09466 180 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 SKIP12755 728 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 UNGP13051 313 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-219ENST00000641513 CXCR5P32302 372 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 PNPLA4P41247 253 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 TAF6P49848 677 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 NDST1P52848 882 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 ATN1P54259 1190 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-219ENST00000641513 EPHB4P54760 987 aa9.4□□□□□ -0.9
PHGDH-219ENST00000641513 NOMO3P69849 1222 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms