RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 GIT2Q14161 759 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TRIP10Q15642 601 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 COBLL1Q53SF7 1204 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 ILDR2Q71H61 639 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 SCUBE1Q8IWY4 988 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 RBM12BQ8IXT5 1001 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TTC17Q96AE7 1141 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 CLPTM1LQ96KA5 538 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 RNF146Q9NTX7 359 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 B2RBV5 119 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 GAS7O60861 476 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 C16orf72Q14CZ0 275 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 SUPT20HL1Q3ZLR7 823 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 SIX5Q8N196 739 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 DCPSQ96C86 337 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 BTBD7Q9P203 1132 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 ANGPTL2Q9UKU9 493 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 EIF4BP23588 611 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 SLC34A1Q06495 639 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 BAATQ14032 418 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 LBRQ14739 615 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 LIN52Q52LA3 116 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 MIIPQ5JXC2 388 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TPH2Q8IWU9 490 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TRAPPC9Q96Q05 1148 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 ERGIC2Q96RQ1 377 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 DCUN1D5Q9BTE7 237 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 SLITRK6Q9H5Y7 841 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 HEY2Q9UBP5 337 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
RBFOX1-224ENST00000641259 TBX10O75333 385 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 LMNAP02545 664 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 MX2P20592 715 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ABHD8Q96I13 439 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 OLFM3Q96PB7 478 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 IKZF4Q9H2S9 585 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 PRDM16Q9HAZ2 1276 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ERVK-5Q9HDB9 667 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 PXMP2Q9NR77 195 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 R3HDM2Q9Y2K5 976 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 CCDC195A0A1B0GUA6 201 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 FECHP22830 423 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ATP1A4Q13733 1029 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 PCNX4Q63HM2 1172 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 UBL4BQ8N7F7 174 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 PYDC1Q8WXC3 89 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 USTQ9Y2C2 406 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 UBIAD1Q9Y5Z9 338 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 HOXD13P35453 343 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 INHBCP55103 352 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 DSG1Q02413 1049 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 FSTL1Q12841 308 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 COG2Q14746 738 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 FOXB2Q5VYV0 432 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 RBM44Q6ZP01 1051 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 MCF2L2Q86YR7 1114 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ARHGAP24Q8N264 748 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ATG4AQ8WYN0 398 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 RMDN3Q96TC7 470 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 SPATA16Q9BXB7 569 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 SUCLA2Q9P2R7 463 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 ASTN1O14525 1302 aa12.48□□□□□ -0.41
RBFOX1-224ENST00000641259 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 EXOC3O60645 756 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 MYCLP12524 364 aaPredicted RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 NR2F2P24468 414 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 STAT1P42224 750 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 GALCP54803 685 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 LRRC55Q6ZSA7 311 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 WDR75Q8IWA0 830 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ERMNQ8TAM6 284 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 CDCA5Q96FF9 252 aa12.47□□□□□ -0.41
RBFOX1-224ENST00000641259 ZNF333Q96JL9 665 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms