RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 KCNH7Q9NS40 1196 aa9.52□□□□□ -0.88
PAX6-259ENST00000639916 PPP1R9AQ9ULJ8 1098 aa9.52□□□□□ -0.88
PAX6-259ENST00000639916 FZD1Q9UP38 647 aa9.52□□□□□ -0.88
PAX6-259ENST00000639916 ZNF541Q9H0D2 1346 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 TMEM120BA0PK00 339 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 FBP2O00757 339 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 OPHN1O60890 802 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 MYCLP1P12525 358 aaPredicted RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 NR2F2P24468 414 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 HOXD13P35453 343 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 RASSF2P50749 326 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 SLC29A2Q14542 456 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 ASTE1Q2TB18 679 aaPredicted RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 EDRF1Q3B7T1 1238 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 ANGEL2Q5VTE6 544 aaKnown RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 IZUMO2Q6UXV1 221 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 Q6ZNX1 250 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 C1orf186Q6ZWK4 172 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 EPM2AIP1Q7L775 607 aaPredicted RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 PIP4P2Q8N4L2 257 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 ANKK1Q8NFD2 765 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 IL31RAQ8NI17 732 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 GDAP1Q8TB36 358 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 CASP10Q92851 521 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 LRRC37BQ96QE4 947 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 TGS1Q96RS0 853 aaKnown RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 TRIM31Q9BZY9 425 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 EURLQ9NYK6 297 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 WRAP73Q9P2S5 460 aaPredicted RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 ZNF212Q9UDV6 495 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 DBR1Q9UK59 544 aaKnown RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 WASF2Q9Y6W5 498 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 DDX3XO00571 662 aaKnown RBP eCLIP9.52□□□□□ -0.89
PAX6-259ENST00000639916 CES2O00748 559 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 ZBED4O75132 1171 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 GCNT3O95395 438 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 ITGA4P13612 1032 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 YARSP54577 528 aaKnown RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 MARSP56192 900 aaKnown RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 BACE1P56817 501 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 DSG1Q02413 1049 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 DMPKQ09013 629 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 TBL3Q12788 808 aaKnown RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 KRT72Q14CN4 511 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 EPHA7Q15375 998 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 CCDC153Q494R4 210 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 RRAGAQ7L523 313 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 TRIM59Q8IWR1 403 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 NUP93Q8N1F7 819 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 MYCT1Q8N699 235 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.52□□□□□ -0.89
PAX6-259ENST00000639916 SYTL5Q8TDW5 730 aaPredicted RBP9.52□□□□□ -0.89
PAX6-259ENST00000639916 BHMTQ93088 406 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 WRNIP1Q96S55 665 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 RIT2Q99578 217 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 CGREF1Q99674 301 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 TPK1Q9H3S4 243 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 TRAF3IP3Q9Y228 551 aa9.52□□□□□ -0.89
PAX6-259ENST00000639916 RPTORQ8N122 1335 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 E9PBE3 544 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 PDXKO00764 312 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 STK10O94804 968 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 FAM13AO94988 1023 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 GH1P01241 217 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 CREB1P16220 341 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 KLRC1P26715 233 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 PTPN4P29074 926 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 TCF7P36402 384 aaPredicted RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 RPS6P62753 249 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 AUHQ13825 339 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 NAB2Q15742 525 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 ZNF394Q53GI3 561 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 FAAH2Q6GMR7 532 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 B3GNT9Q6UX72 402 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 PATL1Q86TB9 770 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 ZC3H3Q8IXZ2 948 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 SCYL3Q8IZE3 742 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 BBS5Q8N3I7 341 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 SCAIQ8N9R8 606 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 NLGN2Q8NFZ4 835 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 UHMK1Q8TAS1 419 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 ACTRT1Q8TDG2 376 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 ARHGEF2Q92974 986 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 NACC2Q96BF6 587 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 PPP1R10Q96QC0 940 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 TAAR1Q96RJ0 339 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 LXNQ9BS40 222 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 TRIM51Q9BSJ1 452 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 DRC3Q9H069 523 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 STMN4Q9H169 189 aaPredicted RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 ATAD3AQ9NVI7 634 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 NDUFA13Q9P0J0 144 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 RABL2AQ9UBK7 228 aaPredicted RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 FRMD4BQ9Y2L6 1034 aa9.51□□□□□ -0.89
PAX6-259ENST00000639916 UTP11Q9Y3A2 253 aaKnown RBP9.51□□□□□ -0.89
PAX6-259ENST00000639916 LRRC53A6NM62 1247 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms