RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 MUC3BQ9H195 1237 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 TRIQKQ629K1 86 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 QKIQ96PU8 341 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 POLR3FQ9H1D9 316 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 SOAT1P35610 550 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 KIZQ2M2Z5 673 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 KIF12Q96FN5 646 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 NEU2Q9Y3R4 380 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 GDF11O95390 407 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 PCSK1P29120 753 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 RESTQ13127 1097 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 SPASTQ9UBP0 616 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 F8W810 466 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 PPP2R1BP30154 601 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ADORA1P30542 326 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ZCCHC8Q6NZY4 707 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ILKAPQ9H0C8 392 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 KLHL11Q9NVR0 708 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ATP6V1C1P21283 382 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ACTN3Q08043 901 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 AGR3Q8TD06 166 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 CNOT3O75175 753 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 PRCPP42785 496 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ATXN7L3BQ96GX2 97 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ABCB1P08183 1280 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 GLMNQ92990 594 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 ADGRL3Q9HAR2 1447 aa18.79■□□□□ 0.6
CACNA1A-247ENST00000637769 MAGEA13PA6NCF6 341 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 GSTA3Q16772 222 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 SPATA18Q8TC71 538 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 CASP10Q92851 521 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 LXNQ9BS40 222 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 ASMTLO95671 621 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 MUTP22033 750 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 COX10Q12887 443 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 USP10Q14694 798 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 WDR48Q8TAF3 677 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 L3MBTL3Q96JM7 780 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 SRGAP2O75044 1071 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 PTK7Q13308 1070 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 PKP1Q13835 747 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 TSNQ15631 228 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 RAB6BQ9NRW1 208 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 ASZ1Q8WWH4 475 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 APOL4Q9BPW4 351 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 ALOX15P16050 662 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 FGFR4P22455 802 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 CHRNB3Q05901 458 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 CRYMQ14894 314 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 SFR1Q86XK3 245 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 CCNJLQ8IV13 435 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 MMGT1Q8N4V1 131 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 CLRN2A0PK11 232 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 HEATR9A2RTY3 570 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 SLC18A3Q16572 532 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 NAPEPLDQ6IQ20 393 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 RAD54BQ9Y620 910 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 C2orf81A6NN90 581 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 RBP5P82980 135 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 MTA1Q13330 715 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 KYNUQ16719 465 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 EEPD1Q7L9B9 569 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 IL17RAQ96F46 866 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 SPATA33Q96N06 139 aa18.78■□□□□ 0.6
CACNA1A-247ENST00000637769 PDXKO00764 312 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 AIM2O14862 343 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 S100A9P06702 114 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 SLC20A1Q8WUM9 679 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 PRR23AA6NEV1 266 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 WARSP23381 471 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 SKP1P63208 163 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 CLMNQ96JQ2 1002 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 KIFC1Q9BW19 673 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 DDX47Q9H0S4 455 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 ANXA9O76027 345 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 ZCWPW2Q504Y3 356 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 ATP9BO43861 1147 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 HARS2P49590 506 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 MANSC1Q9H8J5 431 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 SNX12Q9UMY4 172 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 ADGRA2Q96PE1 1338 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 CNTFP26441 200 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 CYP51A1Q16850 503 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 SUGP1Q8IWZ8 645 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 LRRC39Q96DD0 335 aa18.77■□□□□ 0.6
CACNA1A-247ENST00000637769 STX11O75558 287 aa18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 CHI3L1P36222 383 aaPredicted RBP18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 TRIM48Q8IWZ4 208 aa18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 AVENQ9NQS1 362 aaPredicted RBP18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 APEX2Q9UBZ4 518 aa18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 EMSYQ7Z589 1322 aa18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 PDZK1Q5T2W1 519 aa18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 KLHL24Q6TFL4 600 aa18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 PEG10Q86TG7 708 aaKnown RBP18.77■□□□□ 0.59
CACNA1A-247ENST00000637769 GTF3C2Q8WUA4 911 aaPredicted RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms