RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 INTS13Q9NVM9 706 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 SLC27A5Q9Y2P5 690 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 YIPF1Q9Y548 306 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 DENND4CQ5VZ89 1909 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 MYH10P35580 1976 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 MIA3Q5JRA6 1907 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 A0A1W2PQ27 194 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 A0A1W2PQ64 194 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 A0A1W2PQD8 194 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 MTMR11A4FU01 709 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 KLRC4O43908 158 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 DLATP10515 647 aaKnown RBP14.86□□□□□ -0.03
PNKP-228ENST00000637325 MYL4P12829 197 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 CEBPBP17676 345 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 TNNI1P19237 187 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 AVPR2P30518 371 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 PLA2G5P39877 138 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 VCPP55072 806 aaKnown RBP14.86□□□□□ -0.03
PNKP-228ENST00000637325 TSPY1Q01534 308 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 MYO1EQ12965 1108 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 BMT2Q1RMZ1 405 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 SLC5A9Q2M3M2 681 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 DCP1BQ8IZD4 617 aaKnown RBP14.86□□□□□ -0.03
PNKP-228ENST00000637325 HS6ST3Q8IZP7 471 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 SIX5Q8N196 739 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 ATAD1Q8NBU5 361 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 LEMD2Q8NC56 503 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 OR10T2Q8NGX3 314 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 GOLGA5Q8TBA6 731 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 FAM200AQ8TCP9 573 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 FGF14Q92915 247 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 BORCS6Q96GS4 357 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 CCDC34Q96HJ3 373 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 FAM84AQ96KN4 292 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 PRRX2Q99811 253 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 GDE1Q9NZC3 331 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 CEP72Q9P209 647 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 WNT16Q9UBV4 365 aa14.86□□□□□ -0.03
PNKP-228ENST00000637325 GOLGA6L4A6NEF3 574 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 EXOC3O60645 756 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 PRPF40AO75400 957 aaKnown RBP14.85□□□□□ -0.03
PNKP-228ENST00000637325 VNN2O95498 520 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 TUFMP49411 452 aaKnown RBP14.85□□□□□ -0.03
PNKP-228ENST00000637325 MYL7Q01449 175 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 SMARCB1Q12824 385 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 STK4Q13043 487 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 MGAT5BQ3V5L5 792 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 PRSS36Q5K4E3 855 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 ASTLQ6HA08 431 aaPredicted RBP14.85□□□□□ -0.03
PNKP-228ENST00000637325 WDR49Q8IV35 697 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 TMEM86AQ8N2M4 240 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 OR5B17Q8NGF7 314 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 C2orf15Q8WU43 125 aaKnown RBP14.85□□□□□ -0.03
PNKP-228ENST00000637325 CCDC127Q96BQ5 260 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 TCEAL4Q96EI5 215 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 SEPT5Q99719 369 aaPredicted RBP14.85□□□□□ -0.03
PNKP-228ENST00000637325 KXD1Q9BQD3 176 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 RPP25Q9BUL9 199 aaKnown RBP14.85□□□□□ -0.03
PNKP-228ENST00000637325 CRISPLD1Q9H336 500 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 CA14Q9ULX7 337 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 SNX9Q9Y5X1 595 aa14.85□□□□□ -0.03
PNKP-228ENST00000637325 FAM237AA0A1B0GTK4 181 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 MICAL2O94851 1124 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 RPN1P04843 607 aaKnown RBP14.84□□□□□ -0.03
PNKP-228ENST00000637325 CDR1P51861 262 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 CYP24A1Q07973 514 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 VEPH1Q14D04 833 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 PSMD6Q15008 389 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 TAF12Q16514 161 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 IER5LQ5T953 404 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 KRBA2Q6ZNG9 492 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 ITIH5Q86UX2 942 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 C12orf56Q8IXR9 622 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 KIAA0895Q8NCT3 520 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 GPR152Q8TDT2 470 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 HPDLQ96IR7 371 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 RTP3Q9BQQ7 232 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 GDAP2Q9NXN4 497 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 DDX43Q9NXZ2 648 aaKnown RBP14.84□□□□□ -0.03
PNKP-228ENST00000637325 HSFX1Q9UBD0 423 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 SIX4Q9UIU6 781 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 L1RE1Q9UN81 338 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 ASB3Q9Y575 518 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 CACNA1HO95180 2353 aa14.84□□□□□ -0.03
PNKP-228ENST00000637325 WDFY4Q6ZS81 3184 aa14.83□□□□□ -0.03
PNKP-228ENST00000637325 SOAT2O75908 522 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 ZNF202O95125 648 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 KIF20AO95235 890 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 CCR2P41597 374 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 LHX1P48742 406 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 CLCN5P51795 746 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 GPC5P78333 572 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 TRAPPC11Q7Z392 1133 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 DNAJB7Q7Z6W7 309 aaPredicted RBP14.83□□□□□ -0.04
PNKP-228ENST00000637325 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 TTC9BQ8N6N2 239 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 TOP6BLQ8N6T0 577 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms