RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 SLC30A5Q8TAD4 765 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 LNX1Q8TBB1 728 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 SLC20A1Q8WUM9 679 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 HERVK_113Q902F9 699 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 TMEM176AQ96HP8 235 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 SENP8Q96LD8 212 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 TWNKQ96RR1 684 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 EIF3CQ99613 913 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 AGPAT1Q99943 283 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 ELOVL4Q9GZR5 314 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 DEF6Q9H4E7 631 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 CWH43Q9H720 699 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 SPTLC3Q9NUV7 552 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 CXXC1Q9P0U4 656 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 HCSTQ9UBK5 93 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 HMGXB4Q9UGU5 601 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 NME7Q9Y5B8 376 aa10.23□□□□□ -0.77
CACNA1A-223ENST00000636058 A0A087X0T9 212 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 DDX3XO00571 662 aaKnown RBP eCLIP10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 GABRDO14764 452 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ZNF263O14978 683 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 AKR1B10O60218 316 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 CALCAP01258 141 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ALDH2P05091 517 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 CYP11A1P05108 521 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 GALTP07902 379 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 FAM228BP0C875 321 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ODC1P11926 461 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 GNA15P30679 374 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 BRCC3P46736 316 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 SLC11A1P49279 550 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 HTRA4P83105 476 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 FMO1Q01740 532 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 RASIP1Q5U651 963 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 WSCD1Q658N2 575 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 VPS36Q86VN1 386 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 TNS4Q8IZW8 715 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 TMEM86AQ8N2M4 240 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 SLC4A11Q8NBS3 891 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 OR6B3Q8NGW1 331 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 SPATA18Q8TC71 538 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 HASPINQ8TF76 798 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 SUSD3Q96L08 255 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 LBHD1Q9BQE6 289 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ZSWIM1Q9BR11 485 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 DESI2Q9BSY9 194 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 COLEC11Q9BWP8 271 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 NT5C1AQ9BXI3 368 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 SNX25Q9H3E2 840 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 MARCH5Q9NX47 278 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ADAMTS1Q9UHI8 967 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 STXBP5LQ9Y2K9 1186 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 PRG3Q9Y2Y8 225 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 REXO2Q9Y3B8 237 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ADGRG1Q9Y653 693 aa10.22□□□□□ -0.77
CACNA1A-223ENST00000636058 ARHGEF37A1IGU5 675 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 A8MXQ7 604 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 I3L4J1 428 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 THAP12O43422 761 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 TRAPPC3O43617 180 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 GJB5O95377 273 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 MMEP08473 750 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 CCDC175P0C221 793 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 TYMPP19971 482 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 TNFAIP3P21580 790 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 LMO2P25791 158 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 GNL1P36915 607 aaPredicted RBP10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 BCAR1P56945 870 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 KRT83P78385 493 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 CYP27A1Q02318 531 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 ORC1Q13415 861 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 TAF3Q5VWG9 929 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 FAM117BQ6P1L5 589 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 OSTM1Q86WC4 334 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 PALB2Q86YC2 1186 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 CRYBG2Q8N1P7 616 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 ACRBPQ8NEB7 543 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 PHOSPHO2Q8TCD6 241 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 ZNF606Q8WXB4 792 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 TFAP2BQ92481 460 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 SLC9A7Q96T83 725 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 PCDHB18PQ96TA0 734 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 YME1L1Q96TA2 773 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 NAGPAQ9UK23 515 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 ADAM28Q9UKQ2 775 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 DSEQ9UL01 958 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 FAN1Q9Y2M0 1017 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 PPP2R2CQ9Y2T4 447 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 NR2E3Q9Y5X4 410 aa10.21□□□□□ -0.77
CACNA1A-223ENST00000636058 HCRTO43612 131 aa10.2□□□□□ -0.78
CACNA1A-223ENST00000636058 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
CACNA1A-223ENST00000636058 TADA2AO75478 443 aa10.2□□□□□ -0.78
CACNA1A-223ENST00000636058 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms