RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 PSD3Q9NYI0 1048 aa21.29■■□□□ 1
CLN8-208ENST00000635751 GIT1Q9Y2X7 761 aa21.29■■□□□ 1
CLN8-208ENST00000635751 SMIM28A0A1B0GU29 152 aa21.29■■□□□ 1
CLN8-208ENST00000635751 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.29■■□□□ 1
CLN8-208ENST00000635751 PMM2O15305 246 aa21.29■■□□□ 1
CLN8-208ENST00000635751 EOMESO95936 686 aa21.29■■□□□ 1
CLN8-208ENST00000635751 MLH1P40692 756 aa21.29■■□□□ 1
CLN8-208ENST00000635751 DNA2P51530 1060 aa21.29■■□□□ 1
CLN8-208ENST00000635751 CETN1Q12798 172 aa21.29■■□□□ 1
CLN8-208ENST00000635751 IKBKEQ14164 716 aa21.29■■□□□ 1
CLN8-208ENST00000635751 FAM43BQ6ZT52 329 aaPredicted RBP21.29■■□□□ 1
CLN8-208ENST00000635751 LRRC57Q8N9N7 239 aa21.29■■□□□ 1
CLN8-208ENST00000635751 SLC30A5Q8TAD4 765 aa21.29■■□□□ 1
CLN8-208ENST00000635751 RSAD1Q9HA92 442 aa21.29■■□□□ 1
CLN8-208ENST00000635751 PACSIN2Q9UNF0 486 aaPredicted RBP21.29■■□□□ 1
CLN8-208ENST00000635751 C2CD2Q9Y426 696 aa21.29■■□□□ 1
CLN8-208ENST00000635751 SCN1AP35498 2009 aa21.28■■□□□ 1
CLN8-208ENST00000635751 PHACTR2O75167 634 aa21.28■■□□□ 1
CLN8-208ENST00000635751 KIF4AO95239 1232 aa21.28■■□□□ 1
CLN8-208ENST00000635751 TNNC2P02585 160 aa21.28■■□□□ 1
CLN8-208ENST00000635751 ACRP10323 421 aa21.28■■□□□ 1
CLN8-208ENST00000635751 AFF1P51825 1210 aaKnown RBP21.28■■□□□ 1
CLN8-208ENST00000635751 EPC2Q52LR7 807 aa21.28■■□□□ 1
CLN8-208ENST00000635751 NT5DC4Q86YG4 428 aa21.28■■□□□ 1
CLN8-208ENST00000635751 RPUSD2Q8IZ73 545 aaKnown RBP21.28■■□□□ 1
CLN8-208ENST00000635751 FBXL13Q8NEE6 735 aa21.28■■□□□ 1
CLN8-208ENST00000635751 TPCN2Q8NHX9 752 aa21.28■■□□□ 1
CLN8-208ENST00000635751 SEMA4DQ92854 862 aa21.28■■□□□ 1
CLN8-208ENST00000635751 BADQ92934 168 aa21.28■■□□□ 1
CLN8-208ENST00000635751 PBKQ96KB5 322 aa21.28■■□□□ 1
CLN8-208ENST00000635751 GPR88Q9GZN0 384 aa21.28■■□□□ 1
CLN8-208ENST00000635751 COQ4Q9Y3A0 265 aa21.28■■□□□ 1
CLN8-208ENST00000635751 ARL5CA6NH57 179 aa21.27■■□□□ 1
CLN8-208ENST00000635751 VNN1O95497 513 aa21.27■■□□□ 1
CLN8-208ENST00000635751 CST3P01034 146 aaPredicted RBP21.27■■□□□ 1
CLN8-208ENST00000635751 SYN1P17600 705 aa21.27■■□□□ 1
CLN8-208ENST00000635751 GUCY2FP51841 1108 aa21.27■■□□□ 1
CLN8-208ENST00000635751 EPHB4P54760 987 aa21.27■■□□□ 1
CLN8-208ENST00000635751 SLC7A5Q01650 507 aa21.27■■□□□ 1
CLN8-208ENST00000635751 ZBTB6Q15916 424 aa21.27■■□□□ 1
CLN8-208ENST00000635751 GSTCDQ8NEC7 633 aa21.27■■□□□ 1
CLN8-208ENST00000635751 LMO3Q8TAP4 145 aa21.27■■□□□ 1
CLN8-208ENST00000635751 LNX1Q8TBB1 728 aaPredicted RBP21.27■■□□□ 1
CLN8-208ENST00000635751 DPF3Q92784 378 aa21.27■■□□□ 1
CLN8-208ENST00000635751 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.27■■□□□ 1
CLN8-208ENST00000635751 RAB20Q9NX57 234 aa21.27■■□□□ 1
CLN8-208ENST00000635751 MIOSQ9NXC5 875 aa21.27■■□□□ 1
CLN8-208ENST00000635751 FAN1Q9Y2M0 1017 aa21.27■■□□□ 1
CLN8-208ENST00000635751 DERAQ9Y315 318 aa21.27■■□□□ 1
CLN8-208ENST00000635751 PTGESO14684 152 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 HLA-DRAP01903 254 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 KCNE1P15382 129 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 GYS2P54840 703 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 SYCE1Q8N0S2 351 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 OLIG1Q8TAK6 271 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 C18orf25Q96B23 403 aaPredicted RBP21.27■□□□□ 0.99
CLN8-208ENST00000635751 RPS6KC1Q96S38 1066 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 UBN1Q9NPG3 1134 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 TMEM161AQ9NX61 479 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 PCDHB7Q9Y5E2 793 aa21.27■□□□□ 0.99
CLN8-208ENST00000635751 PIK3CAP42336 1068 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 EMBQ6PCB8 327 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
CLN8-208ENST00000635751 SLFN11Q7Z7L1 901 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 IFT20Q8IY31 132 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 C1orf127Q8N9H9 656 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 ELMO3Q96BJ8 720 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 GDAP1L1Q96MZ0 367 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 SYT11Q9BT88 431 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 IL23AQ9NPF7 189 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 DPP3Q9NY33 737 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 TUBGCP4Q9UGJ1 667 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 FNDC1Q4ZHG4 1894 aaPredicted RBP21.26■□□□□ 0.99
CLN8-208ENST00000635751 NCANO14594 1321 aa21.26■□□□□ 0.99
CLN8-208ENST00000635751 KCNK3O14649 394 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 SCNN1GP51170 649 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 GALCP54803 685 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 TNNC1P63316 161 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 PHLDB3Q6NSJ2 640 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 DNAAF5Q86Y56 855 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 PI4K2AQ9BTU6 479 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 ELAC1Q9H777 363 aaKnown RBP21.25■□□□□ 0.99
CLN8-208ENST00000635751 ZMYND8Q9ULU4 1186 aaPredicted RBP21.25■□□□□ 0.99
CLN8-208ENST00000635751 UBQLN1Q9UMX0 589 aaKnown RBP21.25■□□□□ 0.99
CLN8-208ENST00000635751 INPP5FQ9Y2H2 1132 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 ERICH4A6NGS2 130 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 SYF2O95926 243 aaKnown RBP21.25■□□□□ 0.99
CLN8-208ENST00000635751 ITGB3P05106 788 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 PFKMP08237 780 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 KRT19P08727 400 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 FGFR1P11362 822 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 NCOA4Q13772 614 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 SND1Q7KZF4 910 aaKnown RBP eCLIP21.25■□□□□ 0.99
CLN8-208ENST00000635751 C16orf59Q7L2K0 433 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 GLYCTKQ8IVS8 523 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 BEST2Q8NFU1 509 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 HELQQ8TDG4 1101 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 PPP1R10Q96QC0 940 aaKnown RBP21.25■□□□□ 0.99
CLN8-208ENST00000635751 TSPAN18Q96SJ8 248 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 SIX4Q9UIU6 781 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms