RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TOGARAM1Q9Y4F4 1720 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 MARCH11A6NNE9 402 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 KCNAB3O43448 404 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 HIP1RO75146 1068 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 KRT37O76014 449 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 CYP17A1P05093 508 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 SLC9A1P19634 815 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 BMPR1AP36894 532 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 RECQLP46063 649 aaPredicted RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 SRSF4Q08170 494 aaKnown RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 MLC1Q15049 377 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 GFOD2Q3B7J2 385 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 MAP9Q49MG5 647 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 PDCD4Q53EL6 469 aaKnown RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 TMEM240Q5SV17 173 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 CC2D1AQ6P1N0 951 aaPredicted RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 FRMD7Q6ZUT3 714 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 ZZZ3Q8IYH5 903 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 CPA6Q8N4T0 437 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 LMBR1Q8WVP7 490 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 ZBTB9Q96C00 473 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 POLR3GLQ9BT43 218 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 PCIF1Q9H4Z3 704 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 ACSS2Q9NR19 701 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 POLR3BQ9NW08 1133 aaPredicted RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 ZNF70Q9UC06 446 aaPredicted RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 IP6K2Q9UHH9 426 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 PNMA8BQ9ULN7 279 aaPredicted RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 NOC2LQ9Y3T9 749 aaKnown RBP3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 MRFAP1Q9Y605 127 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 CHD4Q14839 1912 aa3.17□□□□□ -1.9
SMARCB1-208ENST00000634926 DOT1LQ8TEK3 1739 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 MAP3K5Q99683 1374 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 GOLGA8AA7E2F4 631 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 PRPF3O43395 683 aaKnown RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 PEX14O75381 377 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 MT-CO1P00395 513 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 KRT18P05783 430 aaKnown RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 CD40P25942 277 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 CASRP41180 1078 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 GPR3P46089 330 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 FNTBP49356 437 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 KIF11P52732 1056 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 GUCY1B3Q02153 619 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 GTF2H3Q13889 308 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 ZNF169Q14929 603 aaPredicted RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 PCBP2Q15366 365 aaKnown RBP eCLIP3.16□□□□□ -1.98e-7■■■■■ 29.4
SMARCB1-208ENST00000634926 ERCC6LQ2NKX8 1250 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 METRNLQ641Q3 311 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 PGM2L1Q6PCE3 622 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 GPRIN1Q7Z2K8 1008 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 PIK3C3Q8NEB9 887 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 NUP88Q99567 741 aaPredicted RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 ZMAT4Q9H898 229 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 ARNT2Q9HBZ2 717 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 TOPORSQ9NS56 1045 aaPredicted RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 TOMM22Q9NS69 142 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 MKS1Q9NXB0 559 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 KCMF1Q9P0J7 381 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 USP36Q9P275 1121 aaKnown RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 NOB1Q9ULX3 412 aaKnown RBP3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 RIPOR2Q9Y4F9 1068 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 MAST3O60307 1309 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 PKD1L3Q7Z443 1732 aa3.16□□□□□ -1.9
SMARCB1-208ENST00000634926 CICQ96RK0 1608 aaPredicted RBP3.15□□□□□ -1.9
SMARCB1-208ENST00000634926 CACNA1IQ9P0X4 2223 aa3.15□□□□□ -1.9
SMARCB1-208ENST00000634926 TAF1LQ8IZX4 1826 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 KLHL33A6NCF5 533 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MTSS1O43312 755 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 TPD52L2O43399 206 aaKnown RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PLIN1O60240 522 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA12O60330 932 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MYL1P05976 194 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 CT47B1P0C2W7 299 aaPredicted RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PF4V1P10720 104 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 HOXB6P17509 224 aaKnown RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 VCAM1P19320 739 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PTX3P26022 381 aaPredicted RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 CYP2C19P33261 490 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 SCAND1P57086 179 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 NHLH2Q02577 135 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MPP3Q13368 585 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 UBE4AQ14139 1066 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MYBPC3Q14896 1274 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 ODF1Q14990 250 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PDCD1Q15116 288 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 EPHA7Q15375 998 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 EZH2Q15910 746 aaKnown RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MINDY4Q4G0A6 757 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 METTL24Q5JXM2 366 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 ABHD17BQ5VST6 288 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 ESRP1Q6NXG1 681 aaKnown RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 CRELD2Q6UXH1 353 aaPredicted RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PNMA8AQ86V59 439 aaPredicted RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 DGKHQ86XP1 1220 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 NME9Q86XW9 330 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 CERS3Q8IU89 383 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 TPH2Q8IWU9 490 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 CMIPQ8IY22 773 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 AMOTL1Q8IY63 956 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms