RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CHRDQ9H2X0 955 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 USP25Q9UHP3 1055 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 GMEB2Q9UKD1 530 aa16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 CDV3Q9UKY7 258 aaKnown RBP16.86■□□□□ 0.29
SNRNP48-203ENST00000634363 A0A1W2PRU2 124 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 ASIC1P78348 528 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 DUSP4Q13115 394 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 DSTYKQ6XUX3 929 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 ZNF687Q8N1G0 1237 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 LEMD2Q8NC56 503 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 DEPDC1BQ8WUY9 529 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 TRIM9Q9C026 710 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 MRPL44Q9H9J2 332 aaKnown RBP16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 PANK4Q9NVE7 773 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 MAFFQ9ULX9 164 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 SLC27A5Q9Y2P5 690 aa16.85■□□□□ 0.29
SNRNP48-203ENST00000634363 WDR87Q6ZQQ6 2873 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 DCDC2BA2VCK2 349 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 CLTAP09496 248 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 SLFN14P0C7P3 912 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 AFMP43652 599 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 CXCL12P48061 93 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 CCR3P51677 355 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 GUCY2FP51841 1108 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 CDR1P51861 262 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 NDUFA8P51970 172 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 KPNA1P52294 538 aaPredicted RBP16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 EPHB3P54753 998 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 MCL1Q07820 350 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 SPEM2Q0P670 501 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 ZPBP2Q6X784 338 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 TTC8Q8TAM2 541 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 SHKBP1Q8TBC3 707 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 FAM212AQ96EL1 285 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 GPR88Q9GZN0 384 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 HAPLN2Q9GZV7 340 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 PLEKHA5Q9HAU0 1116 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 TRPV5Q9NQA5 729 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 SERTAD1Q9UHV2 236 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 YIPF1Q9Y548 306 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 DMXL1Q9Y485 3027 aa16.84■□□□□ 0.29
SNRNP48-203ENST00000634363 FAM237AA0A1B0GTK4 181 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 FRMD3A2A2Y4 597 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 SLC38A8A6NNN8 435 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 LACTBL1A8MY62 500 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 PRR5-ARHGAP8B1AHC4 643 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 M0QZQ0 153 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 NCANO14594 1321 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 HNRNPDLO14979 420 aaKnown RBP16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 OAZ2O95190 189 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 CHRNB1P11230 501 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 NMT1P30419 496 aaKnown RBP16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 TNFSF9P41273 254 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 LIG4P49917 911 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 EPHA5P54756 1037 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 ARHGAP8P85298 464 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 SATB1Q01826 763 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 LMNB2Q03252 620 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 PPP2R3AQ06190 1150 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 KCNN1Q92952 543 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 C7orf25Q9BPX7 421 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 CRISPLD1Q9H336 500 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 TRPV4Q9HBA0 871 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 PARD6AQ9NPB6 346 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 OLFML3Q9NRN5 406 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 TBX20Q9UMR3 447 aa16.83■□□□□ 0.28
SNRNP48-203ENST00000634363 GPR179Q6PRD1 2367 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 F5P12259 2224 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 RALGAPA1Q6GYQ0 2036 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 ANK1P16157 1881 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 COL4A2P08572 1712 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 TTC26A0AVF1 554 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 GCNT3O95395 438 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 VNN2O95498 520 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 SOX9P48436 509 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 PLD1Q13393 1074 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 STXBP5Q5T5C0 1151 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 OVOS1Q6IE37 1185 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 CNNM4Q6P4Q7 775 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 STXBP4Q6ZWJ1 553 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 ARID3BQ8IVW6 561 aaPredicted RBP16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 CELF5Q8N6W0 485 aaKnown RBP16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 ATAD1Q8NBU5 361 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 E2F7Q96AV8 911 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 HVCN1Q96D96 273 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 RSPRY1Q96DX4 576 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 BLZF1Q9H2G9 400 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 ATXN3LQ9H3M9 355 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 GOLPH3LQ9H4A5 285 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 ST6GALNAC4Q9H4F1 302 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 RPF1Q9H9Y2 349 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms