RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZSCAN5CA6NGD5 496 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 FAM155AB1AL88 458 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 GOLGA8KD6RF30 607 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 POLR3GO15318 223 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 TLR3O15455 904 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 TTI1O43156 1089 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 DAPK3O43293 454 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 DUSP11O75319 330 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 CILPO75339 1184 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CSDE1O75534 798 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 HMGCRP04035 888 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 ITGB3P05106 788 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 KRT19P08727 400 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 FAM163BP0C2L3 166 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 FAM153BP0C7A2 387 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 GNAT1P11488 350 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CYP2C9P11712 490 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 DARSP14868 501 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 CD58P19256 250 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CYP2B6P20813 491 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 BRD2P25440 801 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 GGCXP38435 758 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CETN2P41208 172 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 MARCKSL1P49006 195 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 FNTAP49354 379 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CRYBB1P53674 252 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 CDH8P55286 799 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 COPS2P61201 443 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 LACTBP83111 547 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 DR1Q01658 176 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 INCA1Q0VD86 236 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 PIGHQ14442 188 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 ACAP1Q15027 740 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 STILQ15468 1287 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 WDR72Q3MJ13 1102 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 FAM153CQ494X1 144 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 XKR4Q5GH76 650 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CFAP58Q5T655 872 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 AADACL2Q6P093 401 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 DENND1BQ6P3S1 775 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 NOTUMQ6P988 496 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 LRIG3Q6UXM1 1119 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 MMS22LQ6ZRQ5 1243 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CATSPER4Q7RTX7 472 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 TLK2Q86UE8 772 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CPNE8Q86YQ8 564 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 GSPT2Q8IYD1 628 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 NIPA2Q8N8Q9 360 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 TSEN2Q8NCE0 465 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 C3orf20Q8ND61 904 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 FNIP1Q8TF40 1166 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 PIK3R5Q8WYR1 880 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 HHIPL1Q96JK4 782 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 APBA2Q99767 749 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 C11orf70Q9BRQ4 267 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 KATNAL1Q9BW62 490 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 TXLNGYQ9BZA5 131 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 TRIM7Q9C029 511 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 ELOVL4Q9GZR5 314 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 SDCBP2Q9H190 292 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 CDHR5Q9HBB8 845 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 ERVK-5Q9HDB9 667 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 NMRK2Q9NPI5 230 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 ST7Q9NRC1 585 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 ZDHHC18Q9NUE0 388 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 NXF1Q9UBU9 619 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 PARP2Q9UGN5 583 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 FAM153AQ9UHL3 310 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 RASAL2Q9UJF2 1139 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 BARX2Q9UMQ3 279 aaPredicted RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 AGAP1Q9UPQ3 857 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 PASKQ96RG2 1323 aa5.9□□□□□ -1.47
NEK3-211ENST00000629912 SCN1AP35498 2009 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 TCRBV7S2A1N4TA0A589 114 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 A6NNZ2 444 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 H0YGN5 161 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 PIRO00625 290 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CA12O43570 354 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 PPFIA2O75334 1257 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 NPTXRO95502 500 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CD4P01730 458 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 RPLP2P05387 115 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 MYL3P08590 195 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 KCNE1P15382 129 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CYP3A5P20815 502 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CYP2C19P33261 490 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 PTPN7P35236 360 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 GPD2P43304 727 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 YARSP54577 528 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 GJA9P57773 515 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 TAS2R40P59535 323 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 PTPN11Q06124 597 aaPredicted RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 DMTNQ08495 405 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 SREBF2Q12772 1141 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 MYO1EQ12965 1108 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 KLF1Q13351 362 aaPredicted RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 MTMR3Q13615 1198 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 HIC1Q14526 733 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms