RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 DLX2Q07687 328 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 GPR17Q13304 367 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 CBX2Q14781 532 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 VEPH1Q14D04 833 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 SMAD2Q15796 467 aaKnown RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ZACNQ401N2 412 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 IQCEQ6IPM2 695 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 LILRA6Q6PI73 481 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 TMC5Q6UXY8 1006 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 C4orf50Q6ZRC1 276 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 SV2AQ7L0J3 742 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 GPR149Q86SP6 731 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 TTC39CQ8N584 583 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 VN1R2Q8NFZ6 395 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 SLC7A14Q8TBB6 771 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 SPPL2BQ8TCT7 592 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 SMG7Q92540 1137 aaKnown RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ACSF2Q96CM8 615 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 FAXDC2Q96IV6 333 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ACBD6Q9BR61 282 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 PHF7Q9BWX1 381 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 NAT10Q9H0A0 1025 aaKnown RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 MMRN2Q9H8L6 949 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 CYP4F11Q9HBI6 524 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ANO10Q9NW15 660 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 DDX43Q9NXZ2 648 aaKnown RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 HSFX1Q9UBD0 423 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 SIX4Q9UIU6 781 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 POLIQ9UNA4 740 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 USP15Q9Y4E8 981 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 TIMM13Q9Y5L4 95 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 COL6A3P12111 3177 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 PTPRJQ12913 1337 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TRIM49BA6NDI0 452 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 SPTLC1O15269 473 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TBC1D4O60343 1298 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TACC1O75410 805 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ABLIM3O94929 683 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 C4BPAP04003 597 aaKnown RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TPM2P07951 284 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 POU2F2P09086 479 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 SPATA31D3P0C874 917 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TRIM49P0CI25 452 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TRIM49CP0CI26 452 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 BMP1P13497 986 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 SSTR3P32745 418 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 GCLMP48507 274 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 KCNQ1P51787 676 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 EPHB3P54753 998 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 STX17P56962 302 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 MYL6P60660 151 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 YWHAEP62258 255 aaKnown RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ADCY1Q08828 1119 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TAF12Q16514 161 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 SKOR2Q2VWA4 1001 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TDRD10Q5VZ19 366 aaKnown RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 WSCD1Q658N2 575 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TTI2Q6NXR4 508 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 SYCE2Q6PIF2 218 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 SPATA31D4Q6ZUB0 917 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 OTOP3Q7RTS5 596 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ITIH5Q86UX2 942 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 CREBRFQ8IUR6 639 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ADHFE1Q8IWW8 467 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ZC3H3Q8IXZ2 948 aaKnown RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TCEAL8Q8IYN2 117 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 PLCD3Q8N3E9 789 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 LEMD2Q8NC56 503 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 FBXL13Q8NEE6 735 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 GPT2Q8TD30 523 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 EEF2KMTQ96G04 330 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 TNIP3Q96KP6 325 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 ZNF512Q96ME7 567 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 UHRF1Q96T88 793 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 APOL5Q9BWW9 433 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 S1PR5Q9H228 398 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 FAM124BQ9H5Z6 455 aaPredicted RBP8.36□□□□□ -1.07
NR1I3-235ENST00000628566 VRTNQ9H8Y1 702 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 CDH9Q9ULB4 789 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 L1RE1Q9UN81 338 aa8.36□□□□□ -1.07
NR1I3-235ENST00000628566 WDR27A2RRH5 827 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 A8MXQ7 604 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 ZNF197O14709 1029 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 P4HA2O15460 535 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 FGF19O95750 216 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 CST3P01034 146 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-235ENST00000628566 HLA-DRAP01903 254 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 CD44P16070 742 aaKnown RBP8.35□□□□□ -1.07
NR1I3-235ENST00000628566 BMP6P22004 513 aa8.35□□□□□ -1.07
NR1I3-235ENST00000628566 WARSP23381 471 aaKnown RBP8.35□□□□□ -1.07
NR1I3-235ENST00000628566 GNL1P36915 607 aaPredicted RBP8.35□□□□□ -1.07
NR1I3-235ENST00000628566 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms