RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 DPCR1Q3MIW9 517 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 ZNF667Q5HYK9 610 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 TDRD10Q5VZ19 366 aaKnown RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 LMBRD2Q68DH5 695 aaPredicted RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 ANKRD54Q6NXT1 300 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 LILRA6Q6PI73 481 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 CCDC149Q6ZUS6 474 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 LIMS2Q7Z4I7 341 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 TTC39CQ8N584 583 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 ZNF461Q8TAF7 563 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 ENOX1Q8TC92 643 aaKnown RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 C2orf15Q8WU43 125 aaKnown RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 AUTS2Q8WXX7 1259 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 PPM1EQ8WY54 764 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 POP1Q99575 1024 aaKnown RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 CLSTN3Q9BQT9 956 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 ACBD6Q9BR61 282 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 DNAI2Q9GZS0 605 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 NAT10Q9H0A0 1025 aaKnown RBP8.63□□□□□ -1.03
CHD2-213ENST00000628118 IGFLR1Q9H665 355 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 SFXN1Q9H9B4 322 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 ZDHHC7Q9NXF8 308 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 TMEM63CQ9P1W3 806 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 HSFX1Q9UBD0 423 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 FBXL5Q9UKA1 691 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 FBXW11Q9UKB1 542 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 PCDHGC5Q9Y5F6 944 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 SNX9Q9Y5X1 595 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 BRWD1Q9NSI6 2320 aa8.63□□□□□ -1.03
CHD2-213ENST00000628118 GABRDO14764 452 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 TGM5O43548 720 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 ABLIM3O94929 683 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 CAVIN2O95810 425 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 GLP2RO95838 553 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 ASS1P00966 412 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 CST3P01034 146 aaPredicted RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 HNRNPA1P09651 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
CHD2-213ENST00000628118 ATF2P15336 505 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 TRIM21P19474 475 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 WARSP23381 471 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 IGFBP6P24592 240 aaPredicted RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 ELF1P32519 619 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 OR1D2P34982 312 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 PIK3CAP42336 1068 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 GCLMP48507 274 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 MYL6P60660 151 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 MRPS5P82675 430 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 TSPY1Q01534 308 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 ROR1Q01973 937 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 PPP3CAQ08209 521 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 GPR17Q13304 367 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 SMAD4Q13485 552 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 MAPRE1Q15691 268 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 DCAF17Q5H9S7 520 aaPredicted RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 WDR44Q5JSH3 913 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 C1orf220Q5T0J3 134 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 LIN9Q5TKA1 542 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 TCERG1LQ5VWI1 586 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 WSCD1Q658N2 575 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 CES5AQ6NT32 575 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 TRIM59Q8IWR1 403 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 DCP1BQ8IZD4 617 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 ADGRF2Q8IZF7 708 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 FBXL13Q8NEE6 735 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 SLC35C1Q96A29 364 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 MSLNLQ96KJ4 702 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 B3GALT6Q96L58 329 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 NECTIN4Q96NY8 510 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 XYLT2Q9H1B5 865 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 CYP3A43Q9HB55 503 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 MAGEC2Q9UBF1 373 aaPredicted RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
CHD2-213ENST00000628118 CD207Q9UJ71 328 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 COQ4Q9Y3A0 265 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.62□□□□□ -1.03
CHD2-213ENST00000628118 CDY1Q9Y6F8 540 aa8.62□□□□□ -1.03
CHD2-213ENST00000628118 TBX10O75333 385 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 ZMYND10O75800 440 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 VNN1O95497 513 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 HLA-DRAP01903 254 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 AFPP02771 609 aaKnown RBP8.61□□□□□ -1.03
CHD2-213ENST00000628118 TRIM49P0CI25 452 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 TRIM49CP0CI26 452 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 CPB1P15086 417 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 EPCAMP16422 314 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 KCNA5P22460 613 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
CHD2-213ENST00000628118 GTF2F1P35269 517 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHD2-213ENST00000628118 LTBRP36941 435 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 FMO5P49326 533 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 TYRO3Q06418 890 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 PLD1Q13393 1074 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 NFE2Q16621 373 aaPredicted RBP8.61□□□□□ -1.03
CHD2-213ENST00000628118 WDR72Q3MJ13 1102 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 EP400NLQ6ZTU2 488 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms