RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 DPH6Q7L8W6 267 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 SPATA18Q8TC71 538 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 SHC3Q92529 594 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 ZNF560Q96MR9 790 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 TWNKQ96RR1 684 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 CEP72Q9P209 647 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 PRG3Q9Y2Y8 225 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 FGF18O76093 207 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 TYMPP19971 482 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 TKTP29401 623 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 CDH8P55286 799 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 GPR65Q8IYL9 337 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 ZSWIM1Q9BR11 485 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 SYT11Q9BT88 431 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 COLEC11Q9BWP8 271 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 NIF3L1Q9GZT8 377 aa11.33□□□□□ -0.6
KCNMA1-225ENST00000626620 A0A1W2PQJ5 194 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 H3BNC9 293 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 RAP1GAPP47736 663 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 SPG21Q9NZD8 308 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 CILPO75339 1184 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 SOD2P04179 222 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 RB1P06400 928 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 KRT19P08727 400 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 LMO2P25791 158 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 DSG1Q02413 1049 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 RRAGAQ7L523 313 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.32□□□□□ -0.65e-14■■■■■ 211.5
KCNMA1-225ENST00000626620 DAAM1Q9Y4D1 1078 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 CYB561D2O14569 222 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 SYN3O14994 580 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 ALDH7A1P49419 539 aaKnown RBP11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 FAM71AQ8IYT1 594 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 ATXN2LQ8WWM7 1075 aaKnown RBP11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 SAMD11Q96NU1 681 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 TGS1Q96RS0 853 aaKnown RBP11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 IRAK3Q9Y616 596 aa11.32□□□□□ -0.6
KCNMA1-225ENST00000626620 ERVFC1P60507 584 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 MYO1EQ12965 1108 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 TRPC3Q13507 836 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 COL19A1Q14993 1142 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 MYRIPQ8NFW9 859 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 CAPN11Q9UMQ6 739 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 SNX9Q9Y5X1 595 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 F8VZ95 297 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 PHACTR2O75167 634 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 RAD23BP54727 409 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 STK33Q9BYT3 514 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 EDEM3Q9BZQ6 932 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 DNAJC12Q9UKB3 198 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 MTCH2Q9Y6C9 303 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 SF3B1O75533 1304 aaKnown RBP eCLIP11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 GRM6O15303 877 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 RFX1P22670 979 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 FECHP22830 423 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 SPECC1LQ69YQ0 1117 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 CCDC186Q7Z3E2 898 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 IRF2BP2Q7Z5L9 587 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 SLC4A11Q8NBS3 891 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 PIK3R5Q8WYR1 880 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 CISHQ9NSE2 258 aa11.31□□□□□ -0.6
KCNMA1-225ENST00000626620 FOXN3O00409 490 aaPredicted RBP11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 CBFA2T2O43439 604 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 TADA2AO75478 443 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 PAPLNO95428 1278 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 HNRNPH3P31942 346 aaKnown RBP11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 PPM1AP35813 382 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 CCDC142Q17RM4 750 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 FILIP1LQ4L180 1135 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 LRRTM3Q86VH5 581 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 DDX1Q92499 740 aaKnown RBP11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
KCNMA1-225ENST00000626620 FAM207AQ9NSI2 230 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms