RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 EFCAB14O75071 495 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 MTA2O94776 668 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TIMP1P01033 207 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 MYBL1P10243 752 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 VDRP11473 427 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 KRT5P13647 590 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 GNA15P30679 374 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 CENPCQ03188 943 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 IFI16Q16666 785 aaKnown RBP12.54□□□□□ -0.4
LINC00963-220ENST00000625171 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 SOWAHAQ2M3V2 549 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 GLRA4Q5JXX5 417 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 GLB1LQ6UWU2 654 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 SLC4A11Q8NBS3 891 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TRIM58Q8NG06 486 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 GUCD1Q96NT3 240 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 NT5C1AQ9BXI3 368 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 SDCBP2Q9H190 292 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 LZTFL1Q9NQ48 299 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TMEM39AQ9NV64 488 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
LINC00963-220ENST00000625171 TRIP11Q15643 1979 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 ABHD14A-ACY1A0A1B0GW23 586 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 SPTLC1O15269 473 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 CYP11A1P05108 521 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 MMEP08473 750 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
LINC00963-220ENST00000625171 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-220ENST00000625171 GALCP54803 685 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 CNKSR3Q6P9H4 555 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 PHF13Q86YI8 300 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-220ENST00000625171 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 LPPQ93052 612 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 C16orf45Q96MC5 204 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-220ENST00000625171 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-220ENST00000625171 AVENQ9NQS1 362 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-220ENST00000625171 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 PCDHGC5Q9Y5F6 944 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
LINC00963-220ENST00000625171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 M0QZQ0 153 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 PPEF2O14830 753 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 HUS1O60921 280 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 ABL1P00519 1130 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 FTLP02792 175 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 CYP1A2P05177 515 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 PRLRP16471 622 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 SCNN1GP51170 649 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 CDH8P55286 799 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 GSCP56915 257 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 GPC5P78333 572 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 IKBKEQ14164 716 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 CLLU1OSQ5K130 101 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 URGCPQ8TCY9 931 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 STK32AQ8WU08 396 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 RFFLQ8WZ73 363 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
LINC00963-220ENST00000625171 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 NOX5Q96PH1 765 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■■■■■ 93.7
LINC00963-220ENST00000625171 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 DSEQ9UL01 958 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 GUCA1BQ9UMX6 200 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 NCANO14594 1321 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 CDH23Q9H251 3354 aa12.52□□□□□ -0.41
LINC00963-220ENST00000625171 TTC3P53804 2025 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-220ENST00000625171 PODXLO00592 558 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 TYMPP19971 482 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 CYP2C18P33260 490 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 GNL1P36915 607 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-220ENST00000625171 LHX1P48742 406 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 NDST1P52848 882 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 GNG11P61952 73 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 NOMO3P69849 1222 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms