RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	ELMOD1	Q8N336	334 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	LEMD2	Q8NC56	503 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	BEST2	Q8NFU1	509 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	RIN3	Q8TB24	985 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	SUSD3	Q96L08	255 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	CCDC43	Q96MW1	224 aa	Known RBP	12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	C2orf40	Q9H1Z8	148 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	HPS4	Q9NQG7	708 aa		12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.8	□□□□□ -0.36
SNHG5-213	ENST00000622963	GCN1	Q92616	2671 aa	Known RBP	12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	BCLAF3	A2AJT9	711 aa	Known RBP	12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963		H7C4K7	107 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TAF4	O00268	1085 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	ABLIM1	O14639	778 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	HYAL3	O43820	417 aa	Predicted RBP	12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	EGF	P01133	1207 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	CPB1	P15086	417 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	ATP2B1	P20020	1258 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	GRM5	P41594	1212 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	NAMPT	P43490	491 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	CREB5	Q02930	508 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	ARHGAP29	Q52LW3	1261 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TMEM196	Q5HYL7	178 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	ATF7IP2	Q5U623	682 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	ZNF280D	Q6N043	979 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	SYNPO	Q8N3V7	929 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	MCPH1	Q8NEM0	835 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	DEPTOR	Q8TB45	409 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	FAM200A	Q8TCP9	573 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	EZH1	Q92800	747 aa	Predicted RBP	12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	E2F7	Q96AV8	911 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TMEM209	Q96SK2	561 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TMEM60	Q9H2L4	133 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TTC12	Q9H892	705 aa	Predicted RBP	12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	ATG2B	Q96BY7	2078 aa		12.79	□□□□□ -0.36
SNHG5-213	ENST00000622963	TMEM8B	A6NDV4	472 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	ANTXRL	A6NF34	631 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CPLX1	O14810	134 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	AKAP3	O75969	853 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	ZIC2	O95409	532 aa	Predicted RBP	12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	BAG4	O95429	457 aa	Known RBP	12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CAVIN2	O95810	425 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	U2AF2	P26368	475 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	6e-9	■■□□□ 13.8
SNHG5-213	ENST00000622963	TXK	P42681	527 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CDR1	P51861	262 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PRR20E	P86478	221 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PRR20C	P86479	221 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PRR20D	P86480	221 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PRR20B	P86481	221 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PRR20A	P86496	221 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CYP4F8	P98187	520 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	DUSP4	Q13115	394 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CALCRL	Q16602	461 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PKDCC	Q504Y2	493 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	GPR158	Q5T848	1215 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	TRIM68	Q6AZZ1	485 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	TAS1R3	Q7RTX0	852 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CATSPER3	Q86XQ3	398 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	FAM177A1	Q8N128	213 aa	Predicted RBP	12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	DEFB124	Q8NES8	71 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	TBC1D32	Q96NH3	1257 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	MTMR9	Q96QG7	549 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	GPR88	Q9GZN0	384 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PTPRH	Q9HD43	1115 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	TUBGCP4	Q9UGJ1	667 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	KLK13	Q9UKR3	277 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	PCDHA12	Q9UN75	941 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	TNFSF13B	Q9Y275	285 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	INVS	Q9Y283	1065 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	CELSR3	Q9NYQ7	3312 aa		12.78	□□□□□ -0.36
SNHG5-213	ENST00000622963	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	CDC45	O75419	566 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	KCNE1	P15382	129 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	CYP11B2	P19099	503 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	MCM4	P33991	863 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	ITPRIPL2	Q3MIP1	535 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	ATAD1	Q8NBU5	361 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	BPIFB1	Q8TDL5	484 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	COL26A1	Q96A83	441 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	ATXN3L	Q9H3M9	355 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	CNTN3	Q9P232	1028 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	SLC8A2	Q9UPR5	921 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	SLC27A5	Q9Y2P5	690 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	NUB1	Q9Y5A7	615 aa		12.77	□□□□□ -0.37
SNHG5-213	ENST00000622963	ASCC3	Q8N3C0	2202 aa	Known RBP	12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	CTDNEP1	O95476	244 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	CAPNS1	P04632	268 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	XRCC6	P12956	609 aa	Known RBP eCLIP	12.76	□□□□□ -0.37	9e-12	■■□□□ 12
SNHG5-213	ENST00000622963	ARSA	P15289	507 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	CSRP1	P21291	193 aa	Known RBP	12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	BCKDHB	P21953	392 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	GABRR2	P28476	465 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	SCRN1	Q12765	414 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	ECM1	Q16610	540 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	ZNF568	Q3ZCX4	644 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	SEZ6	Q53EL9	994 aa		12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	SOWAHC	Q53LP3	525 aa	Predicted RBP	12.76	□□□□□ -0.37
SNHG5-213	ENST00000622963	BLOC1S3	Q6QNY0	202 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms