RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ST3GAL1Q11201 340 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 FAM171A1Q5VUB5 890 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 TATDN1Q6P1N9 297 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 CFAP61Q8NHU2 1237 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 SPATA18Q8TC71 538 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 ULK4Q96C45 1275 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 EGFL8Q99944 293 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 MLXIPLQ9NP71 852 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 MID2Q9UJV3 735 aa9.71□□□□□ -0.86
GGA3-223ENST00000621870 SUN1O94901 812 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 GPD1P21695 349 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 RAP1GAPP47736 663 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 CDH18Q13634 790 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ARHGAP15Q53QZ3 475 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 HABP4Q5JVS0 413 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 TRIM42Q8IWZ5 723 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 FBXL16Q8N461 479 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 THOC1Q96FV9 657 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 MS4A14Q96JA4 679 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 CGRRF1Q99675 332 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 NVLO15381 856 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 ENDOD1O94919 500 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 SGPL1O95470 568 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 PON1P27169 355 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ATICP31939 592 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 AVPR1AP37288 418 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 CYP24A1Q07973 514 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ELAVL2Q12926 359 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 AMIGO3Q86WK7 504 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 FAM131BQ86XD5 332 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 FEZF2Q8TBJ5 459 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 FGD4Q96M96 766 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 RSAD1Q9HA92 442 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 TRPM5Q9NZQ8 1165 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ZFATQ9P243 1243 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 SYNPO2Q9UMS6 1093 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ZNF185O15231 689 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ARHGAP25P42331 645 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 CDH8P55286 799 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 RPL10AP62906 217 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 TMPRSS15P98073 1019 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 CELF3Q5SZQ8 465 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 KIAA0319LQ8IZA0 1049 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 ATL2Q8NHH9 583 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 SH3KBP1Q96B97 665 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 PDGFCQ9NRA1 345 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 SMPD4Q9NXE4 827 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 DDX43Q9NXZ2 648 aaKnown RBP9.7□□□□□ -0.86
GGA3-223ENST00000621870 PLAGL2Q9UPG8 496 aa9.7□□□□□ -0.86
GGA3-223ENST00000621870 TTLL13PA6NNM8 815 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SNX2O60749 519 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 RECQL4O94761 1208 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 CHEK2O96017 543 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 VDRP11473 427 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 TYK2P29597 1187 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 CLCN6P51797 869 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 EIF3BP55884 814 aaKnown RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 MAP3K7CLP57077 242 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 PTPN11Q06124 597 aaPredicted RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 EFEMP1Q12805 493 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 NAA30Q147X3 362 aaPredicted RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 ASAP3Q8TDY4 903 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 APBA2Q99767 749 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SLC13A1Q9BZW2 595 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 PORCNQ9H237 461 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.69□□□□□ -0.86
GGA3-223ENST00000621870 SNX12Q9UMY4 172 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 TISP43B9A030 160 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 H7C4K7 107 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 USP2O75604 605 aaPredicted RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 MYL4P12829 197 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 KCNA1Q09470 495 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 MAP7Q14244 749 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 FAM110CQ1W6H9 321 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 MDH1BQ5I0G3 518 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 KCNT1Q5JUK3 1230 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 C6orf118Q5T5N4 469 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 NUGGCQ68CJ6 796 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 RCOR2Q8IZ40 523 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 EMC1Q8N766 993 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 TMC2Q8TDI7 906 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 CALR3Q96L12 384 aaKnown RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 INTS13Q9NVM9 706 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.69□□□□□ -0.86
GGA3-223ENST00000621870 KANSL3Q9P2N6 904 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 PLAAQ9Y263 795 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SLC30A1Q9Y6M5 507 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 H0Y626 953 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 MMEP08473 750 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 AKT1P31749 480 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 PCK1P35558 622 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SLC11A2P49281 568 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 FOXD4Q12950 439 aaPredicted RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 COL9A3Q14050 684 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms