RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SP3Q02447 781 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TAF2Q6P1X5 1199 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 RCOR2Q8IZ40 523 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TMEM199Q8N511 208 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 DNERQ8NFT8 737 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 UBA3Q8TBC4 463 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 COG1Q8WTW3 980 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TMEM8AQ9HCN3 771 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 NOP53Q9NZM5 478 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 OGTO15294 1046 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 CAND2O75155 1236 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 MFSD4BQ5TF39 518 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 METTL7BQ6UX53 244 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TLK2Q86UE8 772 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TXNRD3Q86VQ6 643 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 RNF168Q8IYW5 571 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 MCEEQ96PE7 176 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 KIFC3Q9BVG8 833 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 STK33Q9BYT3 514 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 CHCHD3Q9NX63 227 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 ARHGEF38Q9NXL2 777 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 PYGBP11216 843 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 MUTP22033 750 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 IKBKEQ14164 716 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 COBLL1Q53SF7 1204 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 IGDCC4Q8TDY8 1250 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 ATXN7L3BQ96GX2 97 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 EHD4Q9H223 541 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 C6orf203Q9P0P8 240 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 STX18Q9P2W9 335 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 FAM50BQ9Y247 325 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 ITIH6Q6UXX5 1313 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 TARSL2A2RTX5 802 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 CARNS1A5YM72 827 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 C5orf58C9J3I9 102 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 ZNF263O14978 683 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 DNAJC8O75937 253 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 CABYRO75952 493 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 ADORA2AP29274 412 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 ZC2HC1CQ53FD0 456 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 PATL1Q86TB9 770 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 SLC25A41Q8N5S1 370 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 PTPRN2Q92932 1015 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 EML4Q9HC35 981 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 PPARGC1AQ9UBK2 798 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 PCDHB2Q9Y5E7 798 aa10.25□□□□□ -0.77
CLTCL1-211ENST00000621271 PLSCR1O15162 318 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 ZW10O43264 779 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 MTSS1O43312 755 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 ZNF286BP0CG31 522 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 DSG3P32926 999 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 ARSEP51690 589 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 AMHR2Q16671 573 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 CARNMT1Q8N4J0 409 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 CALML6Q8TD86 181 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 VTA1Q9NP79 307 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 DDIT4Q9NX09 232 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 UBR1Q8IWV7 1749 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 A0A0G2JND7 137 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 SUPT3HO75486 399 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 EPHB2P29323 1055 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 WEE1P30291 646 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 ZRANB3Q5FWF4 1079 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 SPDYAQ5MJ70 313 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 KRT80Q6KB66 452 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 GPAT2Q6NUI2 795 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 SLC30A5Q8TAD4 765 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 OSMRQ99650 979 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 POLR3CQ9BUI4 534 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 UVRAGQ9P2Y5 699 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 WNT10BO00744 389 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 STX7O15400 261 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 EPB42P16452 691 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 GPD1P21695 349 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 VSNL1P62760 191 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 RGMBQ6NW40 437 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 MPZL3Q6UWV2 235 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 HASPINQ8TF76 798 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 ABHD8Q96I13 439 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 WDCPQ9H6R7 721 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 VIPAS39Q9H9C1 493 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 EPB41L4AQ9HCS5 686 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 PSD3Q9NYI0 1048 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 HDAC6Q9UBN7 1215 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 MAD2L2Q9UI95 211 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 HEATR9A2RTY3 570 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 TGFB3P10600 412 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 GHRP10912 638 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 NAMPTP43490 491 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 PTGISQ16647 500 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 HERC6Q8IVU3 1022 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 SNX31Q8N9S9 440 aa10.24□□□□□ -0.77
CLTCL1-211ENST00000621271 IPMKQ8NFU5 416 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms