RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 C17orf75Q9HAS0 396 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 ADAMTS13Q76LX8 1427 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 SLC37A4O43826 429 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 TADA3O75528 432 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 ASS1P00966 412 aaKnown RBP11.91□□□□□ -0.5
CLIP1-219ENST00000620786 LMNAP02545 664 aaKnown RBP11.91□□□□□ -0.5
CLIP1-219ENST00000620786 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
CLIP1-219ENST00000620786 CYP11B2P19099 503 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 ORC1Q13415 861 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 OTULINQ96BN8 352 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLIP1-219ENST00000620786 ADGRG1Q9Y653 693 aa11.91□□□□□ -0.5
CLIP1-219ENST00000620786 KLRC1P26715 233 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 NAMPTP43490 491 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 STK4Q13043 487 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 CRLS1Q9UJA2 301 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ATMINO43313 823 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 HAUS5O94927 633 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 CKMP06732 381 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 RGS4P49798 205 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ARFIP2P53365 341 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 RABGAP1LQ5R372 815 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 BEND6Q5SZJ8 279 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 GPC2Q8N158 579 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 NAF1Q96HR8 494 aaKnown RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 RPRD1AQ96P16 312 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 SPATC1LQ9H0A9 340 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 DSEQ9UL01 958 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 M0QYT0 321 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 CKBP12277 381 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 SLC18A3Q16572 532 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 PCNX4Q63HM2 1172 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 TMC7Q7Z402 723 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ZNF677Q86XU0 584 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 WDR48Q8TAF3 677 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ZC3H7BQ9UGR2 993 aaKnown RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 PHF2O75151 1096 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 THP07101 528 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 MCF2P10911 925 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 MYL4P12829 197 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 EEF1DP29692 281 aaKnown RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 HERVK_113P62684 666 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 MAPRE2Q15555 327 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 UGP2Q16851 508 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ZC3H12BQ5HYM0 836 aaKnown RBP11.9□□□□□ -0.5
CLIP1-219ENST00000620786 TEDDM1Q5T9Z0 273 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 LRRC8EQ6NSJ5 796 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 RGS9BPQ6ZS82 235 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 TRAPPC11Q7Z392 1133 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 ABHD8Q96I13 439 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 NRXN1Q9ULB1 1477 aa11.9□□□□□ -0.5
CLIP1-219ENST00000620786 AGLP35573 1532 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 DDTLA6NHG4 134 aaPredicted RBP11.9□□□□□ -0.51
CLIP1-219ENST00000620786 RPSAP08865 295 aaKnown RBP11.9□□□□□ -0.51
CLIP1-219ENST00000620786 ARP10275 920 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 RPL10AP62906 217 aaKnown RBP11.9□□□□□ -0.51
CLIP1-219ENST00000620786 EPC2Q52LR7 807 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 ARL8AQ96BM9 186 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 RUBCNLQ9H714 662 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 GPRC5CQ9NQ84 441 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 TMX2Q9Y320 296 aa11.9□□□□□ -0.51
CLIP1-219ENST00000620786 OGTO15294 1046 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 ACADMP11310 421 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 CUL2Q13617 745 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 E2F5Q15329 346 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 C1orf146Q5VVC0 180 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 C11orf96Q7Z7L8 435 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 MIB1Q86YT6 1006 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 CALML6Q8TD86 181 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 RSAD1Q9HA92 442 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 CHST12Q9NRB3 414 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 DDIT4Q9NX09 232 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 TRPM5Q9NZQ8 1165 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 AMACRQ9UHK6 382 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 SYCE1LA8MT33 242 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 P4HA2O15460 535 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 AMHP03971 560 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 SLC9A1P19634 815 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 ACO1P21399 889 aaKnown RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 PATL1Q86TB9 770 aaKnown RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 C1orf131Q8NDD1 294 aaKnown RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 FAM129AQ9BZQ8 928 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 EHD4Q9H223 541 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 ALDH1A2O94788 518 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 SETSIPP0DME0 302 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 GGCXP38435 758 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 CSE1LP55060 971 aaKnown RBP11.89□□□□□ -0.51
CLIP1-219ENST00000620786 TRADDQ15628 312 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 MFSD4BQ5TF39 518 aa11.89□□□□□ -0.51
CLIP1-219ENST00000620786 DAGLBQ8NCG7 672 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms