RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ZBTB48P10074 688 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 SLC25A3Q00325 362 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 PPIDQ08752 370 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 DLG1Q12959 904 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 EFTUD2Q15029 972 aaKnown RBP eCLIP10.29□□□□□ -0.766e-6■■□□□ 13.1
TNFAIP3-210ENST00000620204 KBTBD12Q3ZCT8 623 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 HSP90AA5PQ58FG0 334 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 C1orf228Q6PIY5 440 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 HAS1Q92839 578 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 TMEM117Q9H0C3 514 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 EMSYQ7Z589 1322 aa10.29□□□□□ -0.76
TNFAIP3-210ENST00000620204 XPO1O14980 1071 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 AQP4P55087 323 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZNF200P98182 395 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 PSMD6Q15008 389 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ARSHQ5FYA8 562 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 TCHHL1Q5QJ38 904 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZNF384Q8TF68 577 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 GDPD5Q8WTR4 605 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 PRPF18Q99633 342 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 MRPL1Q9BYD6 325 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 PFDN4Q9NQP4 134 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 RABGAP1Q9Y3P9 1069 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 NUMBLQ9Y6R0 609 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ADGRA3Q8IWK6 1321 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 HNRNPCL1O60812 293 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 CHRNA5P30532 468 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SFSWAPQ12872 951 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 TTLL12Q14166 644 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 HIC1Q14526 733 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 PDK3Q15120 406 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 TMEM119Q4V9L6 283 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ARMCX6Q7L4S7 300 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SLC47A2Q86VL8 602 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 TRIML2Q8N7C3 387 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 IFT43Q96FT9 208 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 OXNAD1Q96HP4 312 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 C10orf88Q9H8K7 445 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZBTB21Q9ULJ3 1066 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 AK5Q9Y6K8 562 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 FGFR1P11362 822 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 PEX2P28328 305 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 GTF2IP78347 998 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 GRAPQ13588 217 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 C16orf72Q14CZ0 275 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SLC27A3Q5K4L6 730 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 C3orf62Q6ZUJ4 267 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 PASD1Q8IV76 773 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZC3H12CQ9C0D7 883 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 LIN28AQ9H9Z2 209 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 IFT122Q9HBG6 1241 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 CHD4Q14839 1912 aa10.28□□□□□ -0.76
TNFAIP3-210ENST00000620204 SIGLEC16A6NMB1 481 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZBTB39O15060 712 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 PEX1O43933 1283 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 ECE2O60344 883 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 VCLP18206 1134 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 NELFEP18615 380 aaKnown RBP10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 YWHAGP61981 247 aaKnown RBP eCLIP10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 TFDP1Q14186 410 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 PABPC1LQ4VXU2 614 aaKnown RBP10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 PAOXQ6QHF9 649 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 B3GNT6Q6ZMB0 384 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 ULK2Q8IYT8 1036 aa10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 MTO1Q9Y2Z2 717 aaKnown RBP10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 BAZ2AQ9UIF9 1905 aaKnown RBP10.27□□□□□ -0.76
TNFAIP3-210ENST00000620204 NUP98P52948 1817 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 A0A0J9YVX5 310 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 RBM47A0AV96 593 aaKnown RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CDK8P49336 464 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 JAM2P57087 298 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 GPSM2P81274 684 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CDK16Q00536 496 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CNGA3Q16281 694 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TNFAIP8L3Q5GJ75 292 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TMEM63BQ5T3F8 832 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TMCO4Q5TGY1 634 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TSHZ1Q6ZSZ6 1077 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TMPRSS6Q8IU80 811 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 BBOF1Q8ND07 529 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CPA5Q8WXQ8 436 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 DGCR14Q96DF8 476 aaKnown RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 PDGFDQ9GZP0 370 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 PSMC3IPQ9P2W1 217 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 NCANO14594 1321 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CAPN8A6NHC0 703 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 NCF2P19878 526 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 ANXA13P27216 316 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms