RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 MAGEB16A2A368 324 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 LCHNA4D1U4 455 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 GOLGA6L9A6NEM1 432 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CCNT1O60563 726 aaKnown RBP4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 TBC1D8O95759 1140 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 APOA4P06727 396 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 WEE2P0C1S8 567 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 LAG3P18627 525 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CUL1Q13616 776 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 NAA25Q14CX7 972 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 TRADDQ15628 312 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 AANATQ16613 207 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 PTPN21Q16825 1174 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 AAK1Q2M2I8 961 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 LRIT3Q3SXY7 679 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CFAP100Q494V2 611 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CYP4A22Q5TCH4 519 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 ERMP1Q7Z2K6 904 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 SLC22A9Q8IVM8 553 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 GATA6Q92908 595 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CNOT6LQ96LI5 555 aaKnown RBP4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CCDC74BQ96LY2 380 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 CFHR5Q9BXR6 569 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 XKR8Q9H6D3 395 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 GGA3Q9NZ52 723 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.34□□□□□ -1.723e-8■■■□□ 18.1
UBE2D3-233ENST00000618836 RASAL2Q9UJF2 1139 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 LIMCH1Q9UPQ0 1083 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 PCDHGA11Q9Y5H2 935 aa4.34□□□□□ -1.72
UBE2D3-233ENST00000618836 LRRD1A4D1F6 860 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 DCDC2CA8MYV0 355 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ERVV-2B6SEH9 535 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 GOLGA8SH3BPF8 625 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 GOLGA8MH3BSY2 632 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 SOAT2O75908 522 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 HLA-DRAP01903 254 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 LPOP22079 712 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 EEF1GP26641 437 aaKnown RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 GNA15P30679 374 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ADCY8P40145 1251 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 WNT5AP41221 380 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 OR1G1P47890 313 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 USP14P54578 494 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 NRLP54845 237 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ZNF445P59923 1031 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 NOP14P78316 857 aaKnown RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 OLR1P78380 273 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PLOD1Q02809 727 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 SPAG1Q07617 926 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 CUL3Q13618 768 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 GIT2Q14161 759 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PKDCCQ504Y2 493 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PDPK2PQ6A1A2 396 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 CENPPQ6IPU0 288 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 LBX2Q6XYB7 198 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 FAM47EQ6ZV65 393 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 TADA2BQ86TJ2 420 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 CEP70Q8NHQ1 597 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 CCT6BQ92526 530 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 MED30Q96HR3 178 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PPP1R13BQ96KQ4 1090 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 YME1L1Q96TA2 773 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 COQ7Q99807 217 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 MENTQ9BUN1 341 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 CDK19Q9BWU1 502 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 NUSAP1Q9BXS6 441 aaKnown RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 KRTAP3-3Q9BYR6 98 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 HSPBP1Q9NZL4 362 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 KIF17Q9P2E2 1029 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PRKAG3Q9UGI9 489 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ASIC3Q9UHC3 531 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 SPEF1Q9Y4P9 236 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ASB3Q9Y575 518 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PMS2P1A4D2B8 440 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 OR6C74A6NCV1 312 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 LRRC14BA6NHZ5 514 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 H3BQV1 296 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 APOL1O14791 398 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 FMO6PO60774 539 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PIAS2O75928 621 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ZBTB7AO95365 584 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 POLR3DP05423 398 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 URODP06132 367 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 POLBP06746 335 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 PDHBP11177 359 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 ACSL1P33121 698 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 SOX9P48436 509 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 CD97P48960 835 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 DIO1P49895 249 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 RNF144AP50876 292 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 VBP1P61758 197 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 KRT85P78386 507 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 TFCP2Q12800 502 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 LEXMQ3ZCV2 418 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 SLC39A12Q504Y0 691 aa4.33□□□□□ -1.72
UBE2D3-233ENST00000618836 SIGIRRQ6IA17 410 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms