RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 CENPPQ6IPU0 288 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 PDZD4Q76G19 769 aaPredicted RBP23.58■■□□□ 1.37
TRAF4-217ENST00000618771 CBWD2Q8IUF1 395 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 CCDC105Q8IYK2 499 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 GPR152Q8TDT2 470 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 SCFD1Q8WVM8 642 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 MCRS1Q96EZ8 462 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 FAM84AQ96KN4 292 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 RTP3Q9BQQ7 232 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 SLC2A4RGQ9NR83 387 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 AGAP1Q9UPQ3 857 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 ATP6V1DQ9Y5K8 247 aa23.58■■□□□ 1.37
TRAF4-217ENST00000618771 ZNF233A6NK53 670 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 ACTN4O43707 911 aaKnown RBP23.57■■□□□ 1.36
TRAF4-217ENST00000618771 TMEM191BP0C7N4 346 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 PFKFB1P16118 471 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 NELFCDQ8IXH7 590 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 HS6ST3Q8IZP7 471 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 THEM5Q8N1Q8 247 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 ATAD1Q8NBU5 361 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 LEMD2Q8NC56 503 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 TCEAL4Q96EI5 215 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 KXD1Q9BQD3 176 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 MTMR12Q9C0I1 747 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 KIAA1586Q9HCI6 787 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 SLC39A2Q9NP94 309 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 ASAH2Q9NR71 780 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 AGPAT3Q9NRZ7 376 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 ITGA11Q9UKX5 1188 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 CA14Q9ULX7 337 aa23.57■■□□□ 1.36
TRAF4-217ENST00000618771 A0A1B0GVL5 298 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 STK25O00506 426 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 TGFB1I1O43294 461 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 MICAL2O94851 1124 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 CCR2P41597 374 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 ANGPT1Q15389 498 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 SURF1Q15526 300 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 ADSSL1Q8N142 457 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 CSGALNACT2Q8N6G5 542 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 LRRC52Q8N7C0 313 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 DTWD2Q8NBA8 298 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 PAGE5Q96GU1 130 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 ZCWPW1Q9H0M4 648 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 SLC27A5Q9Y2P5 690 aa23.56■■□□□ 1.36
TRAF4-217ENST00000618771 MIA3Q5JRA6 1907 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 KRBA1A5PL33 1030 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 KRT19P08727 400 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 MYL4P12829 197 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 ALDH1A3P47895 512 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 EPHB3P54753 998 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 EPHA5P54756 1037 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 SNRPFP62306 86 aaKnown RBP23.55■■□□□ 1.36
TRAF4-217ENST00000618771 GPC5P78333 572 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 FOXK2Q01167 660 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 BFSP1Q12934 665 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 BMT2Q1RMZ1 405 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 SLC39A12Q504Y0 691 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 LMBRD2Q68DH5 695 aaPredicted RBP23.55■■□□□ 1.36
TRAF4-217ENST00000618771 HS2ST1Q7LGA3 356 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 TTC9BQ8N6N2 239 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 CXorf38Q8TB03 319 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 ANKRD36BP1Q96IX9 119 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 DNAJC25Q9H1X3 360 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 INTS13Q9NVM9 706 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 HSFX1Q9UBD0 423 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 USP25Q9UHP3 1055 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 SIX4Q9UIU6 781 aa23.55■■□□□ 1.36
TRAF4-217ENST00000618771 CLIC2O15247 247 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 RFX1P22670 979 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 RBP5P82980 135 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 SNRNP35Q16560 246 aaKnown RBP23.54■■□□□ 1.36
TRAF4-217ENST00000618771 POTEHQ6S545 545 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 SCAND2PQ9GZW5 306 aaPredicted RBP23.54■■□□□ 1.36
TRAF4-217ENST00000618771 ARHGEF3Q9NR81 526 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 HPSEQ9Y251 543 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 PTPRJQ12913 1337 aa23.54■■□□□ 1.36
TRAF4-217ENST00000618771 EP300Q09472 2414 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-217ENST00000618771 DENND4CQ5VZ89 1909 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 ZNF292O60281 2723 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 NRG2O14511 850 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-217ENST00000618771 KLRC4O43908 158 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 ECI2O75521 394 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 TNNC2P02585 160 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 CYP2J2P51589 502 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 BECN1Q14457 450 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 SCARA3Q6AZY7 606 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 PDCL2Q8N4E4 241 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 OR5B17Q8NGF7 314 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 TBC1D17Q9HA65 648 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 EXOC1Q9NV70 894 aa23.53■■□□□ 1.36
TRAF4-217ENST00000618771 R3HCC1Q9Y3T6 440 aaKnown RBP23.53■■□□□ 1.36
TRAF4-217ENST00000618771 HUS1O60921 280 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 MOSPD3O75425 235 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 SOAT2O75908 522 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 GJA1P17302 382 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 SMARCB1Q12824 385 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 KNOP1Q1ED39 458 aaKnown RBP23.52■■□□□ 1.36
TRAF4-217ENST00000618771 DUOXA2Q1HG44 320 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 MGAT5BQ3V5L5 792 aa23.52■■□□□ 1.36
TRAF4-217ENST00000618771 WDR49Q8IV35 697 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms