RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 APOBEC2Q9Y235 224 aaKnown RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 EPG5Q9HCE0 2579 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 NCOR2Q9Y618 2525 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ZNF638Q14966 1978 aaKnown RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 KLF18A0A0U1RQI7 1052 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 SLC38A8A6NNN8 435 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 B4GALT5O43286 388 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 OPHN1O60890 802 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 SLITRK3O94933 977 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 TDP2O95551 362 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 PRKCBP05771 671 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 SYPP08247 313 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ENGP17813 658 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 RXRAP19793 462 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 TNFRSF4P43489 277 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ZNF77Q15935 545 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 E2F4Q16254 413 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 XKR9Q5GH70 373 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 TOGARAM2Q6ZUX3 1019 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 CEP57Q86XR8 500 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 ARID3BQ8IVW6 561 aaPredicted RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 GALNT15Q8N3T1 639 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 USP33Q8TEY7 942 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 LRRC3BQ96PB8 259 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 GCNAQ96QF7 691 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 POLR3CQ9BUI4 534 aaPredicted RBP5.02□□□□□ -1.61
SNCA-213ENST00000618500 SNTG2Q9NY99 539 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 DSEQ9UL01 958 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 DERAQ9Y315 318 aa5.02□□□□□ -1.61
SNCA-213ENST00000618500 NYNRINQ9P2P1 1898 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 DPYSL4O14531 572 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 ABLIM1O14639 778 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 DEXIO95424 95 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 BAG4O95429 457 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 TOP3BO95985 862 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 TUFMP49411 452 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 CREB5Q02930 508 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 CTXN3Q4LDR2 81 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 HEATR6Q6AI08 1181 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 CENPPQ6IPU0 288 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 TCEAL6Q6IPX3 200 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 NEK8Q86SG6 692 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 METTL3Q86U44 580 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 GLYCTKQ8IVS8 523 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 HDDC3Q8N4P3 179 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 WHAMMQ8TF30 809 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 OSCP1Q8WVF1 389 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 TCEAL3Q969E4 200 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 BBC3Q96PG8 261 aaPredicted RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 ZCWPW1Q9H0M4 648 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 C17orf75Q9HAS0 396 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 ABCB6Q9NP58 842 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 KCNG1Q9UIX4 513 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 ACACBO00763 2458 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 SLC37A4O43826 429 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 RNF40O75150 1001 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 B3GAT3O94766 335 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 MYL4P12829 197 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 YARSP54577 528 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 ZBTB6Q15916 424 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 MAP7D1Q3KQU3 841 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 PREPLQ4J6C6 727 aaPredicted RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 LYSMD4Q5XG99 296 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 RNF19BQ6ZMZ0 732 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 GAREM2Q75VX8 874 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 TRMT11Q7Z4G4 463 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 NAXDQ8IW45 347 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 CMTM8Q8IZV2 173 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 TSTD1Q8NFU3 115 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 EZH1Q92800 747 aaPredicted RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 KIFAP3Q92845 792 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 DYDC2Q96IM9 177 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 MYRFLQ96LU7 910 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 CDC6Q99741 560 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 EIF2AK1Q9BQI3 630 aaKnown RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 CCDC94Q9BW85 323 aaPredicted RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 FAM124BQ9H5Z6 455 aaPredicted RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 OSGEPQ9NPF4 335 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 KLK14Q9P0G3 267 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 SUSD2Q9UGT4 822 aa5.01□□□□□ -1.61
SNCA-213ENST00000618500 MBD1Q9UIS9 605 aaPredicted RBP5.01□□□□□ -1.61
SNCA-213ENST00000618500 MTMR11A4FU01 709 aa5□□□□□ -1.61
SNCA-213ENST00000618500 EIF4E1BA6NMX2 242 aaKnown RBP5□□□□□ -1.61
SNCA-213ENST00000618500 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5□□□□□ -1.61
SNCA-213ENST00000618500 AP5Z1O43299 807 aa5□□□□□ -1.61
SNCA-213ENST00000618500 ALDH1A3P47895 512 aa5□□□□□ -1.61
SNCA-213ENST00000618500 SOX9P48436 509 aa5□□□□□ -1.61
SNCA-213ENST00000618500 AKAP17AQ02040 695 aaKnown RBP5□□□□□ -1.61
SNCA-213ENST00000618500 CAMK2BQ13554 666 aa5□□□□□ -1.61
SNCA-213ENST00000618500 PKDCCQ504Y2 493 aa5□□□□□ -1.61
SNCA-213ENST00000618500 EOGTQ5NDL2 527 aa5□□□□□ -1.61
SNCA-213ENST00000618500 GPR158Q5T848 1215 aa5□□□□□ -1.61
SNCA-213ENST00000618500 NT5DC1Q5TFE4 455 aa5□□□□□ -1.61
SNCA-213ENST00000618500 XKR5Q6UX68 686 aa5□□□□□ -1.61
SNCA-213ENST00000618500 MON1AQ86VX9 555 aa5□□□□□ -1.61
SNCA-213ENST00000618500 CD302Q8IX05 232 aa5□□□□□ -1.61
SNCA-213ENST00000618500 SNIP1Q8TAD8 396 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms