RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ECE2O60344 883 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 IL12AP29459 219 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 MCL1Q07820 350 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 LIN54Q6MZP7 749 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 PKN3Q6P5Z2 889 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 EHD1Q9H4M9 534 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 SUGCTQ9HAC7 445 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 NGRNQ9NPE2 291 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 SRP68Q9UHB9 627 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 PCDHA4Q9UN74 947 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 PCDH11XQ9BZA7 1347 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 STX4Q12846 297 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 THOC2Q8NI27 1593 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 GLG1Q92896 1179 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 RNPEPL1Q9HAU8 725 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 RBM12Q9NTZ6 932 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 TTC26A0AVF1 554 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 SRP54P61011 504 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 IL5RAQ01344 420 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 SPDYE7PQ495Y7 208 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 RWDD4Q6NW29 188 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 GET4Q7L5D6 327 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 FAM213AQ9BRX8 229 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 PABPC4Q13310 644 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 BTBD10Q9BSF8 475 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 GGA1Q9UJY5 639 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 EPN2O95208 641 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 MSR1P21757 451 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 CCNHP51946 323 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 CCZ1BP86790 482 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 CCZ1P86791 482 aaPredicted RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 ITPRIPL1Q6GPH6 555 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 TXNDC11Q6PKC3 985 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 MTDHQ86UE4 582 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 MINDY2Q8NBR6 621 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 OR6Y1Q8NGX8 325 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 PSMA8Q8TAA3 256 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 SIPA1Q96FS4 1042 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 XPO7Q9UIA9 1087 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 STMND1H3BQB6 276 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 GPKOWQ92917 476 aaPredicted RBP eCLIP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 SMAD5Q99717 465 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 MMTAG2Q9BU76 263 aaKnown RBP15.64■□□□□ 0.09
COL5A1-208ENST00000618395 ASAP1Q9ULH1 1129 aa15.64■□□□□ 0.09
COL5A1-208ENST00000618395 IRS4O14654 1257 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 APRTP07741 180 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 S100A2P29034 98 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 GSSP48637 474 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TSPAN14Q8NG11 270 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 FAM172AQ8WUF8 416 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 CRNNQ9UBG3 495 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 SNRPAP09012 282 aaKnown RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 PHKA1P46020 1223 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 ARHGEF16Q5VV41 709 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 PROX1Q92786 737 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 ILKAPQ9H0C8 392 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 DMTF1Q9Y222 760 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 ATP6V1B2P21281 511 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 NR1H2P55055 460 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 DNAJC11Q9NVH1 559 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 FOXO3O43524 673 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TLR2O60603 784 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 DLG4P78352 724 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 KCTD4Q8WVF5 259 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 PRCCQ92733 491 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 UGP2Q16851 508 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TYW3Q6IPR3 259 aaKnown RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TAP1Q03518 808 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 ABRAXAS1Q6UWZ7 409 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 SETD9Q8NE22 299 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 RAD51CO43502 376 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 FAM20BO75063 409 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 POLD3Q15054 466 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TMED8Q6PL24 325 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-208ENST00000618395 CLEC17AQ6ZS10 378 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TMPRSS6Q8IU80 811 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 TASP1Q9H6P5 420 aa15.63■□□□□ 0.09
COL5A1-208ENST00000618395 PSMD14O00487 310 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 CCNKO75909 580 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 FTLP02792 175 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 FAM83BQ5T0W9 1011 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 FAAH2Q6GMR7 532 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 CYP39A1Q9NYL5 469 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 APOL3O95236 402 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 FEN1P39748 380 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 TFAMQ00059 246 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 RBM44Q6ZP01 1051 aaKnown RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 GCNAQ96QF7 691 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 C9orf16Q9BUW7 83 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 UBE2QL1A1L167 161 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 KLRF2D3W0D1 207 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 UBAP1LF5GYI3 381 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 PRPF4O43172 522 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 RCVRNP35243 200 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 ALDH5A1P51649 535 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-208ENST00000618395 EID3Q8N140 333 aa15.62■□□□□ 0.09
COL5A1-208ENST00000618395 PLEKHA5Q9HAU0 1116 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms