RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 MYO1CO00159 1063 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 OPA1O60313 960 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 HSF2BPO75031 334 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 LLGL1Q15334 1064 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 SIX1Q15475 284 aaPredicted RBP18.62■□□□□ 0.57
CNOT3-209ENST00000617930 MAP3K21Q5TCX8 1036 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 FOXR1Q6PIV2 292 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 CXCL17Q6UXB2 119 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 PRELID2Q8N945 189 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 ZNF296Q8WUU4 475 aaPredicted RBP18.62■□□□□ 0.57
CNOT3-209ENST00000617930 ANKRD36BP1Q96IX9 119 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 HERPUD2Q9BSE4 406 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 ADAM22Q9P0K1 906 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 NRCAMQ92823 1304 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 SPOPO43791 374 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 ZEB2O60315 1214 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 IL18RAPO95256 599 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 TNNC2P02585 160 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 ITGB3P05106 788 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 KRT19P08727 400 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 GNASQ5JWF2 1037 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 PLEKHA7Q6IQ23 1121 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 UBL4BQ8N7F7 174 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 WHAMMQ8TF30 809 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 TWNKQ96RR1 684 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 HMGXB4Q9UGU5 601 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 FEZ2Q9UHY8 353 aaPredicted RBP18.61■□□□□ 0.57
CNOT3-209ENST00000617930 LCMT1Q9UIC8 334 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 TCRBV5S1A1TA0A578 114 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 ORC1Q13415 861 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 CCSAPQ6IQ19 270 aaPredicted RBP18.61■□□□□ 0.57
CNOT3-209ENST00000617930 TTC27Q6P3X3 843 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 TRIM51Q9BSJ1 452 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 BCO2Q9BYV7 579 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 RSPH14Q9UHP6 348 aa18.61■□□□□ 0.57
CNOT3-209ENST00000617930 RRN3P2A6NIE6 340 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 MYBL1P10243 752 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 MMP8P22894 467 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 NKX3-2P78367 333 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 WDR72Q3MJ13 1102 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 TRIM72Q6ZMU5 477 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 C1orf131Q8NDD1 294 aaKnown RBP18.6■□□□□ 0.57
CNOT3-209ENST00000617930 SEC14L1Q92503 715 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 WNT8BQ93098 351 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 SLITRK6Q9H5Y7 841 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 SMYD3Q9H7B4 428 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 CYTH4Q9UIA0 394 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 GINS2Q9Y248 185 aa18.6■□□□□ 0.57
CNOT3-209ENST00000617930 CYP2C9P11712 490 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 FLT3P36888 993 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 RPL7AP62424 266 aaKnown RBP18.59■□□□□ 0.57
CNOT3-209ENST00000617930 NNTQ13423 1086 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 ALS2CLQ60I27 953 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 C10orf67Q8IYJ2 551 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 TMEM40Q8WWA1 233 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 DNAJB3Q8WWF6 145 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 PIK3R5Q8WYR1 880 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 C18orf8Q96DM3 657 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 RASSF4Q9H2L5 321 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 GRIN2DO15399 1336 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 DAPK3O43293 454 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 RAD23BP54727 409 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 TAS2R40P59535 323 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
CNOT3-209ENST00000617930 PAK2Q13177 524 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 ANKS1BQ7Z6G8 1248 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 KLHDC9Q8NEP7 349 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 DDX27Q96GQ7 796 aaKnown RBP18.59■□□□□ 0.57
CNOT3-209ENST00000617930 VCPIP1Q96JH7 1222 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 SCLT1Q96NL6 688 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 EIF2AQ9BY44 585 aaKnown RBP18.59■□□□□ 0.57
CNOT3-209ENST00000617930 TJP2Q9UDY2 1190 aa18.59■□□□□ 0.57
CNOT3-209ENST00000617930 SMIM35A0A1B0GVV1 85 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 RARAP10276 462 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 RARBP10826 455 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 TCF4P15884 667 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 PTGIRP43119 386 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 ZNF252P-AS1Q0IIN9 211 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 DENND1BQ6P3S1 775 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 ZNF410Q86VK4 478 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 SLC13A5Q86YT5 568 aaPredicted RBP18.58■□□□□ 0.56
CNOT3-209ENST00000617930 ZMAT2Q96NC0 199 aaKnown RBP18.58■□□□□ 0.56
CNOT3-209ENST00000617930 OSMRQ99650 979 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 SH3GL2Q99962 352 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 ASB7Q9H672 318 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 XPNPEP3Q9NQH7 507 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 RNF19AQ9NV58 838 aa18.58■□□□□ 0.56
CNOT3-209ENST00000617930 MYO1FO00160 1098 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 SHOX2O60902 331 aaPredicted RBP18.57■□□□□ 0.56
CNOT3-209ENST00000617930 PROSCO94903 275 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 HMGCRP04035 888 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
CNOT3-209ENST00000617930 RWDD2BP57060 319 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 NBPF20Q3BBV1 942 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 TRIM11Q96F44 468 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 ELOVL4Q9GZR5 314 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 HES2Q9Y543 173 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 ERLIN2O94905 339 aa18.57■□□□□ 0.56
CNOT3-209ENST00000617930 CDH5P33151 784 aaPredicted RBP18.57■□□□□ 0.56
CNOT3-209ENST00000617930 OGDHQ02218 1023 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms