RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RPL7AP62424 266 aaKnown RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 APBB1IPQ7Z5R6 666 aaPredicted RBP18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 FEZF2Q8TBJ5 459 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 SNX27Q96L92 541 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 ZNF518BQ9C0D4 1074 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 RNF19AQ9NV58 838 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 GABRQQ9UN88 632 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 CEP83Q9Y592 693 aa18.41■□□□□ 0.54
PCDHGC3-205ENST00000617641 O00370 1275 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 PHF2O75151 1096 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 PAEPP09466 180 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 P4HA1P13674 534 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 HSPA6P17066 643 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 TM4SF4P48230 202 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 HLTFQ14527 1009 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 CYP4A22Q5TCH4 519 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 NT5DC4Q86YG4 428 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 CD302Q8IX05 232 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 C7orf31Q8N865 590 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 C18orf8Q96DM3 657 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 APOL6Q9BWW8 343 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 CYP3A43Q9HB55 503 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 PIN4Q9Y237 131 aaKnown RBP18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 RALGAPA2Q2PPJ7 1873 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 ECHS1P30084 290 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 PSMC4P43686 418 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 AARSP49588 968 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 FAM193AP78312 1265 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 DR1Q01658 176 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 PTPN11Q06124 597 aaPredicted RBP18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 NNTQ13423 1086 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 PPP2R5EQ16537 467 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 ERICH1Q86X53 443 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 TRIM6Q9C030 488 aaPredicted RBP18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 CYTH4Q9UIA0 394 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 USTQ9Y2C2 406 aa18.4■□□□□ 0.54
PCDHGC3-205ENST00000617641 TCRBV5S1A1TA0A578 114 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 DAPK3O43293 454 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 MED7O43513 233 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 DUSP11O75319 330 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 YARSP54577 528 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TAS2R40P59535 323 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 CUL1Q13616 776 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 GLRA4Q5JXX5 417 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 DNAJC24Q6P3W2 148 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TRIB2Q92519 343 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 MAGOHBQ96A72 148 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TMEM176AQ96HP8 235 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 PLEKHA5Q9HAU0 1116 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TUBGCP4Q9UGJ1 667 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TMEM191CA6NGB0 347 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 PPEF2O14830 753 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 RECQL4O94761 1208 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 AKAP5P24588 427 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 GABPB1Q06547 395 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 PCBP1Q15365 356 aaKnown RBP eCLIP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 SIX1Q15475 284 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 PTPN20Q4JDL3 420 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 SMYD5Q6GMV2 418 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 C18orf25Q96B23 403 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 MCEEQ96PE7 176 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TRIM31Q9BZY9 425 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 NEUROG2Q9H2A3 272 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 DPH5Q9H2P9 285 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 TJP2Q9UDY2 1190 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 PRDM4Q9UKN5 801 aa18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 UTP11Q9Y3A2 253 aaKnown RBP18.39■□□□□ 0.53
PCDHGC3-205ENST00000617641 AGPSO00116 658 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 RARAP10276 462 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 CYBAP13498 195 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 HOXC8P31273 242 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 GJC1P36383 396 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 GGCXP38435 758 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 FCGRTP55899 365 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 HSP90B2PQ58FF3 399 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 GNASQ5JWF2 1037 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 TTC27Q6P3X3 843 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 RIN2Q8WYP3 895 aaPredicted RBP18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 LHX5Q9H2C1 402 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 DERAQ9Y315 318 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 DNAH12Q6ZR08 3092 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 GOLGA6BA6NDN3 693 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 STAU1O95793 577 aaKnown RBP18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 SYF2O95926 243 aaKnown RBP18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 CHRNA3P32297 505 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 SSR1P43307 286 aaKnown RBP18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 GYS2P54840 703 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 ZNF252P-AS1Q0IIN9 211 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 PLVAPQ9BX97 442 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 IP6K2Q9UHH9 426 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 MTUS1Q9ULD2 1270 aa18.38■□□□□ 0.53
PCDHGC3-205ENST00000617641 MICAL2O94851 1124 aa18.37■□□□□ 0.53
PCDHGC3-205ENST00000617641 PGK1P00558 417 aa18.37■□□□□ 0.53
PCDHGC3-205ENST00000617641 GNAT1P11488 350 aa18.37■□□□□ 0.53
PCDHGC3-205ENST00000617641 AXLP30530 894 aa18.37■□□□□ 0.53
PCDHGC3-205ENST00000617641 FLT3LGP49771 235 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms