RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 FBXO32Q969P5 355 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 COX16Q9P0S2 106 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TRIM10Q9UDY6 481 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PCDHB5Q9Y5E4 795 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 WDR19Q8NEZ3 1342 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GOLGA8RI6L899 631 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 KRT14P02533 472 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PI16Q6UXB8 463 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 OTOP2Q7RTS6 562 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 FAM35AQ86V20 835 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GPRASP2Q96D09 838 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 NMRK1Q9NWW6 199 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PA2G4Q9UQ80 394 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3DA0A087WVF3 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3IA0A087WXS9 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3EA0A087X179 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3KA0A087X1G2 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3FA6NER0 549 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3LB9A6J9 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PRKCBP05771 671 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3HP0C7X1 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 DLATP10515 647 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 FGFR1P11362 822 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SKIDA1Q1XH10 827 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 RARS2Q5T160 578 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3GQ6DHY5 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3CQ6IPX1 549 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GIMAP6Q6P9H5 292 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CHPFQ8IZ52 775 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TBC1D3Q8IZP1 549 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 RASGEF1AQ8N9B8 481 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 L3MBTL4Q8NA19 623 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GPR156Q8NFN8 814 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 STX18Q9P2W9 335 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 RASGRF2O14827 1237 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 SNX2O60749 519 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GSTA1P08263 222 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 GSTA2P09210 222 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ITGA7Q13683 1181 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 VGLL4Q14135 290 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 EXOC3L4Q17RC7 722 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CCDC38Q502W7 563 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CENPPQ6IPU0 288 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 CDH19Q9H159 772 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 OSGEPL1Q9H4B0 414 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 FBRSQ9HAH7 460 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 TDRKHQ9Y2W6 561 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 ZNF236Q9UL36 1845 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 STX1BP61266 288 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 RAD51AP2Q09MP3 1159 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 FOXD4L5Q5VV16 416 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 FOXD4L4Q8WXT5 416 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 VMP1Q96GC9 406 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 DCBLD2Q96PD2 775 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 ACE2Q9BYF1 805 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 ARMC7Q9H6L4 198 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 NHEJ1Q9H9Q4 299 aaPredicted RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 TYW1Q9NV66 732 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 ADAMTS13Q76LX8 1427 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PSMD3O43242 534 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
LPP-220ENST00000617246 GRAMD4Q6IC98 578 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 AGPAT4Q9NRZ5 378 aa3.53□□□□□ -1.84
LPP-220ENST00000617246 MCF2LO15068 1137 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 CNTN5O94779 1100 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 SRGNP10124 158 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 ARHGDIBP52566 201 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 GRM2Q14416 872 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 RETSATQ6NUM9 610 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 Q6ZUG5 572 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 PKD2L2Q9NZM6 624 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 SRRDQ9UH36 339 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 RAPGEFL1Q9UHV5 662 aa3.53□□□□□ -1.85
LPP-220ENST00000617246 TLR2O60603 784 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ELK3P41970 407 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ELP6Q0PNE2 266 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 FAAH2Q6GMR7 532 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 LPCAT2Q7L5N7 544 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GPBP1Q86WP2 473 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PXYLP1Q8TE99 480 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CINPQ9BW66 212 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 PRKD2Q9BZL6 878 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 AMBRA1Q9C0C7 1298 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RIPK3Q9Y572 518 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 AKR1B10O60218 316 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 BCAT1P54687 386 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PSMC5P62195 406 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TFAMQ00059 246 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 PDSS1Q5T2R2 415 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SPRYD7Q5W111 196 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TIGD7Q6NT04 549 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 MARCH10Q8NA82 808 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 OR8D1Q8WZ84 308 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ULK4Q96C45 1275 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RMDN1Q96DB5 314 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KIFC3Q9BVG8 833 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ACSS2Q9NR19 701 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TBC1D7Q9P0N9 293 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZBTB5O15062 677 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms