RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 GRM1Q13255 1194 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 MAMLD1Q13495 774 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 SURF1Q15526 300 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 LIN9Q5TKA1 542 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 C1orf54Q8WWF1 131 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 NAP1L3Q99457 506 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 FAM118BQ9BPY3 351 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 HERPUD2Q9BSE4 406 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 G3BP2Q9UN86 482 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 CNTN6Q9UQ52 1028 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 SNX24Q9Y343 169 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 UTP11Q9Y3A2 253 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 ZEB2O60315 1214 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 ECEL1O95672 775 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 KRT14P02533 472 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 RARAP10276 462 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 SLC10A6Q3KNW5 377 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 SLC13A5Q86YT5 568 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 EMID1Q96A84 441 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 ARL8AQ96BM9 186 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 RUFY1Q96T51 708 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 HEMGNQ9BXL5 484 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 TJP2Q9UDY2 1190 aa16.53■□□□□ 0.24
SEMA3B-212ENST00000616701 ANK1P16157 1881 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 TLR3O15455 904 aaKnown RBP16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 TSPAN1O60635 241 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 TAS2R40P59535 323 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 PTP4A2Q12974 167 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 TAF1CQ15572 869 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 CFAP58Q5T655 872 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 LRRC31Q6UY01 552 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 AVENQ9NQS1 362 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 HES2Q9Y543 173 aa16.52■□□□□ 0.24
SEMA3B-212ENST00000616701 TCF4P15884 667 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 CTNNA2P26232 953 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 POLR2BP30876 1174 aaKnown RBP16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 BEX3Q00994 111 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 ZNF667Q5HYK9 610 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 OLFML2BQ68BL8 750 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 KCTD16Q68DU8 428 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 OR2W6PQ8NHA6 318 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 TWNKQ96RR1 684 aa16.52■□□□□ 0.23
SEMA3B-212ENST00000616701 UNCXA6NJT0 531 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 PEX19P40855 299 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 ATP13A4Q4VNC1 1196 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 DENND1BQ6P3S1 775 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 JAMLQ86YT9 394 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 ATG4AQ8WYN0 398 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 OSMRQ99650 979 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 PHF2O75151 1096 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 MYBL1P10243 752 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 IRX1P78414 480 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 HIC1Q14526 733 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 ZFYVE27Q5T4F4 411 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 CCDC137Q6PK04 289 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 TRIM72Q6ZMU5 477 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 WDTC1Q8N5D0 677 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 ACSF2Q96CM8 615 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
SEMA3B-212ENST00000616701 CEP350Q5VT06 3117 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 GOLGA8SH3BPF8 625 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 NPTXRO95502 500 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 MCF2P10911 925 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 CUL1Q13616 776 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 IQSEC1Q6DN90 963 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 PHF13Q86YI8 300 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 WHAMMQ8TF30 809 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 MCEEQ96PE7 176 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 APOL6Q9BWW8 343 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 NFKBIZQ9BYH8 718 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 SLC15A5A6NIM6 579 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 IL18RAPO95256 599 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 C1QTNF12Q5T7M4 302 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 CCDC105Q8IYK2 499 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 SH2D3CQ8N5H7 860 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 BRCA2P51587 3418 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 PI4K2BG5E9Z4 385 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 PROSCO94903 275 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 SMIM10L2AP0DMW4 78 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 SMIM10L2BP0DMW5 78 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 SIX1Q15475 284 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 FAM187BQ17R55 369 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 TLK2Q86UE8 772 aa16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 UBLCP1Q8WVY7 318 aaPredicted RBP16.5■□□□□ 0.23
SEMA3B-212ENST00000616701 PIK3R2O00459 728 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 MMP8P22894 467 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 PTGIRP43119 386 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 PLTPP55058 493 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 NNTQ13423 1086 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 TMEM132DQ14C87 1099 aa16.49■□□□□ 0.23
SEMA3B-212ENST00000616701 TTMPQ5BVD1 217 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms