RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
AL353770.3-201ENST00000616253 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
AL353770.3-201ENST00000616253 PARP2Q9UGN5 583 aa10.65□□□□□ -0.7
AL353770.3-201ENST00000616253 PCDHGC3Q9UN70 934 aa10.65□□□□□ -0.7
AL353770.3-201ENST00000616253 IPPQ9Y573 584 aa10.65□□□□□ -0.7
AL353770.3-201ENST00000616253 TUBBP07437 444 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 PAEPP09466 180 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 MMP8P22894 467 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 ZBTB6Q15916 424 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 MAP3K21Q5TCX8 1036 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 C8orf74Q6P047 294 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 SESTD1Q86VW0 696 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 TMEM35BQ8NCS4 154 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 SMG8Q8ND04 991 aaKnown RBP10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 RAET1EQ8TD07 263 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 CD101Q93033 1021 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 SENP6Q9GZR1 1112 aaPredicted RBP10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 CARD9Q9H257 536 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 ARFGAP3Q9NP61 516 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 TMEM59LQ9UK28 342 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 UBQLN1Q9UMX0 589 aaKnown RBP10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 CEP83Q9Y592 693 aa10.65□□□□□ -0.71
AL353770.3-201ENST00000616253 GRIN2DO15399 1336 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 FRMPD3Q5JV73 1810 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 BRCA2P51587 3418 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 SMIM28A0A1B0GU29 152 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 TLR3O15455 904 aaKnown RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 MED7O43513 233 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 ERLIN1O75477 346 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 ZMYND10O75800 440 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 ZRANB2O95218 330 aaKnown RBP eCLIP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 CHRNA1P02708 482 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 CDH5P33151 784 aaPredicted RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 INCA1Q0VD86 236 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 ZNF211Q13398 564 aaPredicted RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 MAMLD1Q13495 774 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 DENND1BQ6P3S1 775 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 PCSK9Q8NBP7 692 aaKnown RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 HDAC7Q8WUI4 952 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 TMEM176AQ96HP8 235 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 RNPC3Q96LT9 517 aaKnown RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 KRT12Q99456 494 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 AP1M1Q9BXS5 423 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 ZNF518BQ9C0D4 1074 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 BARX2Q9UMQ3 279 aaPredicted RBP10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 SCINQ9Y6U3 715 aa10.64□□□□□ -0.71
AL353770.3-201ENST00000616253 CCDC85CA6NKD9 419 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 FGGP02679 453 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 CALB1P05937 261 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 KCNE1P15382 129 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 MCM3P25205 808 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 CTNNA2P26232 953 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 NDST1P52848 882 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 SLC7A5Q01650 507 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 MGAT3Q09327 533 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 NFX1Q12986 1120 aaKnown RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 PTGISQ16647 500 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 C9orf57Q5W0N0 161 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 KLHL7Q8IXQ5 586 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 WDTC1Q8N5D0 677 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 ARRDC4Q8NCT1 418 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 HNRNPLLQ8WVV9 542 aaKnown RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 MRPL47Q9HD33 250 aaKnown RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 TTC7AQ9ULT0 858 aaPredicted RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 ST3GAL5Q9UNP4 418 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 SNX9Q9Y5X1 595 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 MYO1FO00160 1098 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 KRIT1O00522 736 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 GJB6O95452 261 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 ITGA4P13612 1032 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 THPOP40225 353 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 PEX5P50542 639 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 LONRF2Q1L5Z9 754 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 GLE1Q53GS7 698 aaKnown RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 XKR4Q5GH76 650 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 AADACL2Q6P093 401 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 RNF180Q86T96 592 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 RPAINQ86UA6 219 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 ERICH1Q86X53 443 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 TTC39CQ8N584 583 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 HINFPQ9BQA5 517 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 FAM124BQ9H5Z6 455 aaPredicted RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 PARVAQ9NVD7 372 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 SAGE1Q9NXZ1 904 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 STIM2Q9P246 746 aa10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 DMGDHQ9UI17 866 aaKnown RBP10.63□□□□□ -0.71
AL353770.3-201ENST00000616253 M0QYV0 167 aa10.62□□□□□ -0.71
AL353770.3-201ENST00000616253 XPOTO43592 962 aaKnown RBP10.62□□□□□ -0.71
AL353770.3-201ENST00000616253 RRP9O43818 475 aaKnown RBP10.62□□□□□ -0.71
AL353770.3-201ENST00000616253 MICAL2O94851 1124 aa10.62□□□□□ -0.71
AL353770.3-201ENST00000616253 PROSCO94903 275 aa10.62□□□□□ -0.71
AL353770.3-201ENST00000616253 CD4P01730 458 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms