RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 GRAMD1AQ96CP6 724 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PRMT1Q99873 361 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 DHX35Q9H5Z1 703 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 LRRC19Q9H756 370 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAM49BQ9NUQ9 324 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 DDX20Q9UHI6 824 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TPX2Q9ULW0 747 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 USH1CQ9Y6N9 552 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 COPEO14579 308 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 MAGEB2O15479 319 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 RIPK2O43353 540 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 MMP8P22894 467 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 NLRP11P59045 1033 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ERMARDQ5T6L9 678 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 EEF1DP3Q658K8 133 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CPNE8Q86YQ8 564 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 HSPH1Q92598 858 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CGRRF1Q99675 332 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TMEM121Q9BTD3 319 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPATC1LQ9H0A9 340 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 KLC2Q9H0B6 622 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ELP3Q9H9T3 547 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TXLNGQ9NUQ3 528 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CHMP2BQ9UQN3 213 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 R3HDM2Q9Y2K5 976 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 A8MXQ7 604 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 DCDC2CA8MYV0 355 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PEX5P50542 639 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 OAZ1P54368 228 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 RBP5P82980 135 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 OTUD4Q01804 1114 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TAP1Q03518 808 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PTPN11Q06124 597 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 KLHL38Q2WGJ6 581 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTC27Q6P3X3 843 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZNF572Q7Z3I7 529 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 KIF2BQ8N4N8 673 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRAPPC12Q8WVT3 735 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 BSNDQ8WZ55 320 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 FIZ1Q96SL8 496 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZNF518BQ9C0D4 1074 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PORCNQ9H237 461 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 BFARQ9NZS9 450 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TMEM59LQ9UK28 342 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 NOCTQ9UK39 431 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 IQANK1A0A1B0GTG1 560 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CLGNO14967 610 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ASAP2O43150 1006 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 NOMO3P69849 1222 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 HSDL1Q3SXM5 330 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 DAB2IPQ5VWQ8 1189 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 KCNV1Q6PIU1 500 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 RSAD1Q9HA92 442 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 TMEM51Q9NW97 253 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ERAP1Q9NZ08 941 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CFAP69A5D8W1 941 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 SHOX2O60902 331 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ESRRAP11474 423 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CDH8P55286 799 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 JAM2P57087 298 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 SESN3P58005 492 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 SYCP2LQ5T4T6 812 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 CYB5D1Q6P9G0 228 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PDZD4Q76G19 769 aaPredicted RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ERO1BQ86YB8 467 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 ANKRD13AQ8IZ07 590 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 FUKQ8N0W3 1084 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 SMC1BQ8NDV3 1235 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 C7orf43Q8WVR3 580 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAF2Q96CS3 445 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 DDX56Q9NY93 547 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 WHRNQ9P202 907 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPARGC1AQ9UBK2 798 aaKnown RBP5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 SHOC2Q9UQ13 582 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 NCANO14594 1321 aa5.93□□□□□ -1.46
SYNCRIP-204ENST00000616122 GAS2O43903 313 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SHBGP04278 402 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 TMEM132BQ14DG7 1078 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 CYP4A22Q5TCH4 519 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZSWIM2Q8NEG5 633 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 KIF12Q96FN5 646 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 PWWP2AQ96N64 755 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 NCAPGQ9BPX3 1015 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 NT5C1AQ9BXI3 368 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 NOP53Q9NZM5 478 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 DNPEPQ9ULA0 475 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 KDM3BQ7LBC6 1761 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 MYH2Q9UKX2 1941 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 TULP2O00295 520 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SNX3O60493 162 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 UBOX5O94941 541 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZWINTO95229 277 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 VCPP55072 806 aaKnown RBP5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ORC1Q13415 861 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 RCN2Q14257 317 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 LBX2Q6XYB7 198 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARMCX2Q7L311 632 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 CLEC4DQ8WXI8 215 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC40A1Q9NP59 571 aa5.92□□□□□ -1.46
SYNCRIP-204ENST00000616122 HAUS2Q9NVX0 235 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms