RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 NLRP11P59045 1033 aaKnown RBP11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 KLF1Q13351 362 aaPredicted RBP11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 VGLL4Q14135 290 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RHBDF2Q6PJF5 856 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCDC50Q8IVM0 306 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PCDHGC3Q9UN70 934 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 C15orf41Q9Y2V0 281 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SCINQ9Y6U3 715 aa11.5□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RARGP13631 454 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 NOMO3P69849 1222 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FAM187BQ17R55 369 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TTC27Q6P3X3 843 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SHCBP1Q8NEM2 672 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ZNF570Q96NI8 536 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FNBP1Q96RU3 617 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ROPN1BQ9BZX4 212 aaPredicted RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ROPN1Q9HAT0 212 aaPredicted RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ADARB2Q9NS39 739 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SCAF8Q9UPN6 1271 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 UMODL1Q5DID0 1318 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TOM1L1O75674 476 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 GH1P01241 217 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CALRP27797 417 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 LACTBP83111 547 aaPredicted RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TAP1Q03518 808 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PTK6Q13882 451 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ANKRD35Q8N283 1001 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FGD4Q96M96 766 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SH2D3AQ9BRG2 576 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FOXP3Q9BZS1 431 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RBAKQ9NYW8 714 aaPredicted RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 POLR2AP24928 1970 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 hCG_2014768A0A024R1R8 64 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RARAP10276 462 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ITIH2P19823 946 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 STAT5BP51692 787 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SOX10P56693 466 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CBLBQ13191 982 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MOGSQ13724 837 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CAPSQ13938 189 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MESDQ14696 234 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MTERF2Q49AM1 385 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TRMT10CQ7L0Y3 403 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ARMC9Q7Z3E5 817 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 NIPA2Q8N8Q9 360 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 GTF3C2Q8WUA4 911 aaPredicted RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 APOBEC3GQ9HC16 384 aaKnown RBP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PTPRJQ12913 1337 aa11.49□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TP73O15350 636 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ASAP2O43150 1006 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SPAG7O75391 227 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PMS2P54278 862 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ATP11AP98196 1134 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 HOOK3Q86VS8 718 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 DTX3LQ8TDB6 740 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 GRK7Q8WTQ7 553 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 BTBD6Q96KE9 485 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ACO2Q99798 780 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PIDD1Q9HB75 910 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CPSF3Q9UKF6 684 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 B4GALT4O60513 344 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MARCKSL1P49006 195 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RAD23BP54727 409 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 WNT7BP56706 349 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 COPS2P61201 443 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCDC6Q16204 474 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CELF3Q5SZQ8 465 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 WLSQ5T9L3 541 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 LIN9Q5TKA1 542 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 EXD1Q8NHP7 514 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 BICD1Q96G01 975 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 GPR20Q99678 358 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MRPL4Q9BYD3 311 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FZD8Q9H461 694 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 BRD2P25440 801 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TARSP26639 723 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MAPK4P31152 587 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RPL21P46778 160 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 R3HDM1Q15032 1099 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CYP4F22Q6NT55 531 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCDC62Q6P9F0 684 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ERO1BQ86YB8 467 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms